Brassica rapa (field mustard): 103835458
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Entry
103835458 CDS
T03449
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103835458
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103835458
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103835458
03036 Chromosome and associated proteins [BR:
brp03036
]
103835458
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103835458
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103835458
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103835458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
SCD
CLASP_N
TAF6_C
Cnd1
CEP104-like_TOG
Cobl
Motif
Other DBs
NCBI-GeneID:
103835458
NCBI-ProteinID:
XP_009109883
UniProt:
M4D3E2
LinkDB
All DBs
Position
A08:18381690..18385104
Genome browser
AA seq
588 aa
AA seq
DB search
MAMVDEPLYPIALLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDD
DEVLLAMAEELGVFIPFVGGIEHAHMILPPLESLCTVEETTVREKAVDSLCKIGSQMKES
DLVDSFVPLVKRLAAGEWFAARVSACGLFHVAYQGCTDVLKTELRSSYGQLCQDDMPMVR
RAAASNLGKFATTLESAFLNAEIMTMFDGLTKDDQDSVRLLAVEGCAALGKLLEPQDCVA
RILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCQLLNPELSIQHILPCVKELSTDSSQHVRSALASVIMGMAPILGKDSTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
VPLLASQLGIGFFDDKLGALCMQWMQDKVYSIREAAANNLKRLAEEFGSEWAMQHIVPQV
LDMVNNPHYLHRMMALRAISLMAPVMGSEITCSKFLPVVVEAAKDRVPNIKFNVAKLLQS
LIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALRSIDAAAVAQS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggatgagcccttgtatcccattgctcttctcattgacgagcttaagaac
gatgacatccagcttcgtttgaactctatccgtcggctatctacgattgctcgtgctctt
ggagaggagcgtacgaggaaagagctgattccctttttgagtgagaacagtgatgatgac
gatgaggtgctcctcgcaatggctgaggagttgggagtttttattcccttcgttggtggg
attgagcatgctcatatgattctccctcctcttgaatctctgtgtaccgttgaggagacc
actgtgagagagaaagctgtggactcgctttgtaagattggttctcagatgaaggagagt
gacctcgtcgactcctttgtccctcttgtcaagaggcttgcggctggtgagtggtttgca
gcgagagtttccgcatgtggtttgtttcatgttgcgtaccaaggttgtactgatgtgctg
aagactgagttacggtctagttatggtcagttgtgccaagatgatatgcctatggtgcga
agagctgctgcgtctaacctggggaagtttgctactactctggagtctgcctttttgaat
gctgagatcatgactatgttcgatggtcttactaaagatgatcaagattctgttagactg
ctggctgtggaaggctgtgcagctcttggaaagttgttggagcctcaggattgtgttgca
cgcattttgcctgttattgttaacttctctcaggataaatcttggagggtgcgctacatg
gttgctaatcagctatacgagctttgtgaggcagtgggtcctgattgcacgaagacggat
ttggttcctgcatatgtgagattgctacgggacaatgaggctgaagtgcgaatagcagcg
gcggggaaagtgaccaagttctgtcagcttctgaatccagagctttccattcagcacatc
cttccttgtgtaaaggaattatcaactgattcttctcaacatgtccgctctgctctagct
tcagtaataatggggatggctcctatccttgggaaggactcaaccatcgagcatcttcta
ccaatttttctttcccttttgaaagatgaatttcctgatgtacgcctcaacatcataagc
aaactagaccaagtcaaccaggttattggaattgatctgctgtcacaatccttgttaccg
gcgatcgtagagcttgctgaggatcggcactggagagtcaggcttgctataattgagtat
gttcctctgttggctagccagttaggtatagggttctttgatgacaaactcggagccctt
tgcatgcaatggatgcaagacaaggtctactctatccgtgaagctgcagcaaacaaccta
aagcgccttgcagaggagtttggttctgaatgggcaatgcagcacatagttccccaggtg
ttggacatggtcaacaatccgcactacctacacaggatgatggctctacgtgcaatatct
ctcatggctcctgtgatgggatcagaaatcacgtgctctaagtttcttcctgtggttgtt
gaggcagcaaaagacagagttccaaacatcaagttcaatgttgctaaacttctgcaatcc
ctcatccccatagtcgaccaatccgtggtggacaaaacaatccgtcagtgtttggtggac
ctgagcgaggatcctgatgttgatgttcgctattttgcaaaccaagcgcttcgttccatt
gacgctgcagcagtggcgcaatcctga
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