Brassica rapa (field mustard): 103838591
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Entry
103838591 CDS
T03449
Name
(RefSeq) nuclear pore complex protein NUP98B isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103838591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103838591
03036 Chromosome and associated proteins [BR:
brp03036
]
103838591
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103838591
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103838591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103838591
NCBI-ProteinID:
XP_033135058
LinkDB
All DBs
Position
A09:complement(11038971..11044399)
Genome browser
AA seq
1047 aa
AA seq
DB search
MFGASNPFGQGSNSSSPFGTQTQSVFGQNNNASSNNPFAPKPFGAASSPFGAQTGGSMFG
GTSTGVFGQAQASSPFGASSPFGAQTGGSMFGGTSTGVFGQAQASSPFGASSPFGAQTGG
SMFGGTSTGVFGQAQASSPFGASSQGFGSSTPSFGAPSAPAFGNSPSPFGGTSTFGQNGF
STPQSSPFGSATQQSQPAFGNSTFGSSTPFGASTTPAFGSTNTSAFGASSTPAFGSTNTS
AFGASSTPAFGVSPTPAFGNSGTAFGNNAFGSGGASGTPGFGASSAPAFGFGSSPAFGQT
THSPFGAQGSQSSNSTTFGNQQQGGSRIIPYTSTIDAESGTGAPGKLQSISAMSVHKEKC
HEELRWEDFQRGDKGGKLPAGQTSLFSQPTNPFGQTSTNPTNPTHAFQSTIAPNPNPFGQ
TSGNPTQGFQSTIAPNPNPFGQTAPTPSPFGQTSANPTHAFQSTITPNPNPFGQTSANPT
TGFQSTITPNPNPFGQTAPTPSPFGQTSANPTNPFSQNTPATNTNFSSPFGQPTTPSLFG
TSSNTTPGFAPSSGFAATTTQPFGPSSTPSFASSSVFNSSGSSPSLFSSTPAQGSTPAFS
SGNFNNSQSAQLFSSNPSFAQTGFGQNTNTQPSIFSTPSTGFANMSTSFPSLNTSIAPLS
QTKPAGPTPQQSTQPTQPSFSFNNSGQTQTVAAGGLAFCPVNFGQVPASQPNPVSNLTAT
QPNPFGTLPAVPQISIGQGGNSPSIQYGISSLPVVDRPAPARVSSLLTSRHLLQRRVMLP
ARKYRAGDDSPKVPFFSDEENSNTPRADAFLTPRENPRALLIRSLKKETAAPLKDDTTPL
QENGKRSNGVITNGANNENKNNGEVRDAPPVKANETHENHGGDKNGAKSSPSRAEIESLL
PKLHHAEYFTEPRIQELAGKERANPGYTGRVRDFVVGRHGYGSIKFLGETDVRKLDLEKL
VQFNNREVLVYMDESQKPPVGQGLNKPAEVTLLNIKCMDKKSGKQVKEGPRVEKYKEMLK
RKAEEQGAEFVSYDVVNGEWKFKVEHF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcatctaatccttttggacagggatctaatagcagcagtccttttgggacc
caaactcaatctgtgtttggtcagaacaacaacgcgtctagtaataatccctttgcgcca
aaaccctttggtgctgcttctagtcctttcggcgcgcagactggtggttctatgtttgga
ggtacttcaactggtgtgtttggtcaggctcaagcttcctcccctttcggggcttctagt
ccttttggtgcgcagaccggtggttctatgtttggaggcacttcaaccggtgtgtttggt
caggctcaagcttcttccccttttggtgcttctagtccttttggtgcgcagaccggtggt
tctatgtttggaggcacttcaaccggtgtgtttggtcaggctcaagcttcctcccctttc
ggtgcttcatcacaagggtttgggagctctactccgagctttggagcaccttctgctcct
gcctttggcaattcgccttcaccttttggtggcacttcaacttttggacagaatggcttc
tcaacgcctcagtcaagtcctttcggaagcgccacacaacagtcacagcctgcttttgga
aacagcactttcgggtcatctacaccctttggtgcctctaccacccctgcctttggctct
acgaatacatctgccttcggcgcctcaagcacacctgccttcggctccaccaatacatct
gccttcggtgcctcaagcacacctgcatttggcgtgtcacccactcctgcctttggtaac
tctggcactgcatttggcaacaatgcttttggttctggaggtgcttcaggtacacctggg
tttggcgcttcaagcgctcctgcgtttggttttggctcctccccagctttcggacagact
acgcattctccctttggagctcaaggttctcagtcttcgaactcaacaacctttggaaat
caacaacagggtggtagtagaatcattccatatacatctacaatagatgcagagtctgga
actggagcccctgggaagctacaatcaatttctgctatgagtgtccacaaagaaaaatgc
catgaggagctcaggtgggaggatttccagagaggagataaaggtggaaaacttcctgcg
gggcaaactagtctgttctctcagcccacgaaccctttcggccagacatctaccaatcct
acaaatccaacacacgcctttcaaagcacaatagccccaaacccaaaccctttcggccag
acatctggaaatccaacacaaggctttcaaagcacaatagccccaaacccaaaccctttc
ggccagacagcaccaaccccaagtcctttcggccagacatctgcaaacccaacacacgcc
tttcaaagcacaataaccccaaacccaaaccctttcggccagacatctgcaaacccaaca
accggctttcaaagcacaataaccccaaacccaaaccctttcggccagacagcaccaacc
ccaagccctttcggccagacatctgcaaacccaacaaaccctttcagccaaaacactcca
gcaactaacacaaatttctcgtctccctttggccaacctactaccccatccttgtttgga
acttcatcaaataccacacccggttttgcaccatcctctggttttgcagcaaccactacg
cagccatttggtccatcaagcactccttcatttgcctcttcgtcagtcttcaattcttct
ggctcctctccgtcactgtttagttcgactcctgcacaagggtcaactccagcatttagc
agtggaaactttaacaacagtcagtcagctcagctgtttagctcaaacccctcatttgca
cagactgggtttggacaaaatacaaatacccaacctagcattttcagtacaccttccact
ggattcgcaaacatgtctacaagctttccatccttaaatacaagcatcgctcccttaagt
caaacaaagcctgctggtccgacaccgcagcaatcaactcagccaactcaaccatctttt
agtttcaacaactctggtcagacccaaacagtcgctgcaggtggattggcattttgtcca
gtcaactttgggcaagtgcctgcttcgcaaccaaaccctgtaagtaacctcactgctacg
caaccaaacccatttggaacgcttcctgctgtgcctcagatttcaattggtcaaggtgga
aattcaccttcgattcagtatggaatctccagcttgcctgtcgttgatagacctgcaccg
gccagagtgtcatcactcctgacttctcgacatcttttgcaaagacgggtcatgctgcct
gcaagaaagtaccgtgcgggggatgatagtccaaaggttccattcttcagtgatgaagag
aactccaatacacctagggctgatgcgtttctcactccaagggaaaacccgagagctttg
ttaatacgctcacttaaaaaggaaacagcagcaccgctgaaggatgacacgacccctctg
caagagaatggtaagagatcgaatggggttattactaatggagccaacaacgagaataag
aataatggtgaagttcgtgatgctcctccggtaaaagccaatgagacacatgaaaatcac
ggaggcgacaagaacggcgcaaagagttcaccaagtagagcagagatcgagtcattgctg
ccaaagctgcatcacgctgagtatttcacagagcctcggatccaagaactagctggcaag
gaaagggctaatcctggttataccggacgagtgagggactttgttgtcgggagacacggt
tacggcagcataaagtttctaggagagacggatgtgcgtaagctcgacttggaaaagttg
gttcagttcaacaacagggaagtgcttgtgtacatggacgagagccagaaacctcctgtt
ggtcagggactgaacaagccagcggaagtaacgttgctcaacataaaatgcatggacaag
aagagcgggaagcaagtgaaagaaggcccgagggtggagaagtataaggaaatgctcaag
aggaaagctgaagaacaaggagctgagtttgtgtcttatgatgttgtgaatggcgagtgg
aagtttaaggtcgaacatttttag
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integrated database retrieval system
