Brassica rapa (field mustard): 103844302
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Entry
103844302 CDS
T03449
Name
(RefSeq) cactin
KO
K25058
cactin
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103844302
Spliceosome [BR:
brp03041
]
Complex C
Other components
Complex C specific factors
103844302
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Gene cluster
GFIT
Motif
Pfam:
CactinC_cactus
Cactin_mid
Spot_14
Motif
Other DBs
NCBI-GeneID:
103844302
NCBI-ProteinID:
XP_009119350
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All DBs
Position
A10:1274070..1278629
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AA seq
668 aa
AA seq
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MGSHGKSSRDRDRYAKQKKRRDESESESDSYSSDSDGSSPPRSSRRRKGSSRSSSRRRYH
SSDDSSDSDGGRKSKKRTSSRKPSEEEIKEYIARKAQKKALRAAKKLKTQSVSGYSNDSN
PFGDSNLTEAFVWRKKIEKDVHHGVPLEEFSVKAEKRRRGERMTEVEKVKKRREERAVEK
ARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRLKPIDVLCKHLDGS
DDMDIELSEPYMVFKGLSVKDMEELRDDIKMYLDSDRATPTRVQYWEALIVVCDWELAEA
RKRDALDRARVRGEEPPAELLAQERGLHAGVEADVRKLLDGKTHSELVELQLDIESQLRS
GSAKVVEYWEAVLKRLDIYKAKACLKEIHAEMLRRHLHRLEQRSEDVEANHRLSPVVEGN
EEEINDMNHSDSEEAFSPEPIAEEEEDAYVETEAAGSFSPELMHGDDREEAIDPEEDKKL
LELKRMVVLEKQKKRIKEAMVSKPPPVEDNLEFKAMKAMGAMEEGDAVFGSKAEVNLDSE
VYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKTVQGYKFNIFYPDLVDKIK
APTFTIEKDGTSSETCMIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHLYFN
FKRHRYRR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcatggtaagagtagcagagacagagatagatacgcaaagcagaagaagcgg
agagatgagtctgagtctgagtccgactcttactcctctgactcggacggttcgtccccg
cccaggagctccaggaggaggaagggcagcagcagaagcagcagtcgtcgacgctatcat
tcaagcgatgattcttctgatagcgatggtggacggaagagtaagaagagaacttcgtct
aggaagccttcagaggaagaaatcaaggagtatatcgccagaaaggctcagaagaaggca
ttacgtgcagcaaagaaactgaagactcagtcagtgtctgggtactccaatgattcaaac
ccgtttggggattcgaatctcactgaggcatttgtgtggcggaagaaaattgaaaaagat
gttcaccatggagtaccgttggaggagttttcggttaaagctgagaagagaagacgggga
gaaagaatgacagaggttgaaaaggttaagaagaggagagaagagagagcagtggagaaa
gctcgacatgaggaagaaatggcattattggctagagaacgtgcacgagcggagtttcaa
gattgggagaagaaggaggaggagttccatttcgatcaaagcaaggtgaggtcagagatc
agattgcgtgaagggcgactgaagcctattgacgtgctctgtaagcacttggatggttca
gatgatatggatatcgagctcagtgaaccttacatggttttcaagggactcagtgttaaa
gatatggaagagcttcgtgatgatatcaaaatgtatctggattcagatcgggcaactcca
acacgcgtacagtattgggaggcacttattgtggtatgcgattgggagttagctgaagct
cgtaaaagggatgctttggaccgtgctagagttagaggggaggagcctcctgcagaattg
cttgctcaagagaggggactacacgctggtgttgaagctgacgtgagaaaacttcttgat
gggaagacccactcggagcttgtggaactgcagttggacatcgagtcccagctgcgttct
gggtcagcgaaagtagtagagtattgggaagcggttcttaaacgcctcgatatatacaag
gcaaaggcttgcttgaaagaaatacacgctgagatgctgaggagacatctacatcgcctc
gagcaacgttcagaggatgtagaagctaatcatcgcttatcacctgtggttgaaggaaac
gaggaggagataaacgatatgaatcattccgactctgaagaagcattctctccagagcct
attgcggaggaagaagaagatgcttatgtggaaacagaagcggctggttcgttttcgcca
gagctcatgcacggtgatgatcgtgaagaagcaatcgatcccgaggaagacaagaagcta
ctggaattgaaacggatggttgtgttggagaaacagaagaagcggatcaaagaagctatg
gtctcaaaaccaccacctgtggaagataacttggagtttaaagcaatgaaagcaatggga
gcaatggaagaaggagatgctgtatttggctctaaagctgaagtgaaccttgattctgag
gtatactggtggcatgacaagtaccggccaagaaaaccaaagtacttcaaccgagtccac
acaggttacgagtggaataagtacaaccagactcactatgatcacgataacccgcctcca
aaaaccgttcaagggtacaagttcaacatcttctatccagatttagtagataagatcaag
gctcccacgttcactatagaaaaagatgggacaagctccgaaacttgtatgatccggttc
catgctggtccgccttatgaagacattgcgttccggattgtgaataaggaatgggaatat
tctcacaagaaaggtttcaaatgcacgtttgagcgtgggattttgcatctgtacttcaac
ttcaaacgacaccgttacaggcgataa
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