Brassica rapa (field mustard): 103845235
Help
Entry
103845235 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103845235
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103845235
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103845235
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103845235
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103845235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103845235
NCBI-ProteinID:
XP_009120313
UniProt:
M4CEQ2
LinkDB
All DBs
Position
A10:complement(12466800..12471508)
Genome browser
AA seq
982 aa
AA seq
DB search
MEIQTDQDGSCAAVSSSSASAVFRKIEFHLARKPFNGFSSRGSDFKMETLNPSSSSNNRA
FSLSSVKKVDGPDSLDRELTFTKTIRKIGAGLENLGNTCYLNSVLQCLTYTEPLAAYLQD
VAHEQRCRVAGFCALCAMQRHVRIALQSTGRSLAPKYLVSNLRCVSQNFRKCRQEDAHEY
MINLLECMHKCCLASGVPSESSDAYRSSLVHKIFGGSLRSQVKCAQCSHCSDKFDPFLDL
SLDISRADSLQRALLRFTAVELLDNGSKVYQCERCKQKVKAVKQLTVFKAPSVLTVHLKR
FEAYRSEKIDKKVEFPPAIDMKPFVSGPYEGNLKYTLYGVLVHCGGSIHSGHYYCFVRTS
SGMWYSLDDNEVIQASEKTVFNQKAYMLFYVRDRQNTAPKNPVTVAKKETSKESVAVNRT
SLIVSSNRNDQVNGSTVIKACSLNATVANGTTPLRACDKGSPACLTTPKDVNAKDPPSSV
EGKEILEGQNGTAPVKSNDQGAPAVLIQKDKENPKDPLSSVEAKEILKMENSTAPPSESR
DQGAPAVLTQNELSVVAANVTSPLRSCEQGAPAVLTPKDLNAKETQTNPPSSVERKENLE
RPCDVGAPVVLTQKDLINNNKTLQKEESLPQANGEGSLVKEDSKAACTMMPGKASPLLDD
STNTQILVNLPTSLGKAENSVDEKKSANNLNESDTSLKVKNDNSPMEEAVLDNQTLVHQS
DESATESIKQTSVEETFTTPRKTRKRNMKTVQVGLSSFKLALGVRKKRGRSRTLAVKGTS
ESKKRATDLERSTPLITSKAASSGSAYKHGKGKSVSVDNERIMTSNGNMLLASPIVELKE
RTNQNGAVLASDQQQPLKSSDLSEASQNAKRKRDNSKEEQILSQKEQVTILTRGLPETVV
AKWDEEVSASKKMGSSEGTRIGYVADEWDEEYDRGKKKKIRIKEEMYVGPNPFQAFASKK
QQTDTKKKWSQGRNTAKTGFRI
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggagatccagacggatcaagacggatcttgcgccgccgtttcgtcctcttccgcctcc
gccgttttcagaaagatcgagttccacctcgcgaggaaacccttcaacggcttctctagc
cgcggctccgatttcaagatggagactttgaatccctcctcctcttctaacaacagagcc
ttctcgttatcgtccgttaagaaggtggacggtcccgattcgttggatcgggagcttact
ttcaccaaaaccatccgcaaaatcggtgctggtttggagaatctcgggaacacatgttat
cttaactctgtgttgcaatgtttgacgtacactgagcctttagctgcttacctgcaagac
gtcgcgcatgagcaacgctgccgtgtggcggggttttgtgctttatgtgcaatgcagagg
catgtcaggattgctcttcaatctactggcagaagcttagcacctaagtatttggtctct
aacctgcgatgcgtatcacaaaacttcaggaaatgtaggcaggaagatgcacatgagtac
atgatcaatttgctggagtgtatgcacaagtgttgtctggcttctggtgtaccaagtgaa
tcctctgatgcttacaggagcagcttggtacataaaatttttggtggtagcctccgtagt
caggtgaaatgtgcacagtgttcccattgttccgacaagtttgatccatttcttgacctg
agcctagacatttcgagggcggattcattgcagagagcacttttacgtttcactgcggtt
gagctcttagataatggttcaaaggtttaccagtgtgaaagatgcaagcagaaagttaag
gctgttaaacagcttactgtttttaaagccccttctgttctgactgtacacctgaagcgg
tttgaagcgtatagatccgaaaaaatcgacaagaaagtcgagtttccccctgcgatcgac
atgaaacctttcgtcagtggtccatatgaaggtaatttgaagtacactctatatggtgtg
ttagttcattgtggtggaagtatccattctggtcactactactgctttgttcgcacttca
agtggcatgtggtattcccttgatgataacgaggttatccaagctagtgagaagactgtg
ttcaaccagaaggcgtatatgcttttctatgttcgcgatagacaaaatacagccccaaag
aatccagttaccgtggctaagaaagaaacttccaaagagagcgtcgccgtaaacagaact
tctttgattgtatcttctaacagaaatgatcaagttaatggttcaacagtcatcaaagca
tgtagtttaaacgctactgttgccaacggtacaacacccttgagagcgtgtgataaaggt
tcgcctgcttgcttgaccaccccaaaagatgtgaatgcgaaagatcccccaagcagtgtg
gaggggaaagagatcctggaggggcaaaatggtacagcacctgtgaaatcaaatgatcaa
ggtgctcctgctgtcttaattcaaaaagataaagagaatccgaaagatcccctgagcagt
gtggaggcaaaagagatccttaagatggaaaatagtacagcaccaccctcggaatcacgt
gatcaaggtgctcctgctgtccttacccaaaacgagttaagcgttgttgctgccaatgtt
acatcacccttgaggtcatgtgaacaaggtgctcctgctgtcttgactccaaaagattta
aatgccaaagagactcagacaaatcccccaagcagtgtggagagaaaagagaaccttgag
agaccctgtgatgtaggtgctcctgtagtcttaactcagaaagatttaattaataataac
aagacccttcagaaggaagagtcacttccacaggctaatggggaaggatctttggtaaag
gaggattcaaaggctgcatgcacaatgatgccaggaaaggcttctcctctcctggacgac
agcacaaacactcaaattcttgtgaatttgcctacttctctgggtaaagctgaaaatagc
gttgacgagaagaaatctgctaataatttgaacgagtctgacacttcacttaaggttaaa
aatgataattcacctatggaagaagctgttcttgataatcagactttggtacatcagtcg
gatgaatcggcaacagaatcaataaagcaaacttctgttgaggagaccttcaccacacca
agaaagactcgcaagcgtaacatgaaaaccgtgcaggtggggttatcatctttcaagctg
gcacttggcgttcgcaaaaaaaggggaagatcaagaaccttagctgttaagggtacttcg
gagtccaagaaaagagctacagatctagagcgttccactccactgattactagcaaagct
gcttcttctggctctgcttacaagcatgggaagggtaaaagtgtcagtgtcgataatgaa
aggataatgactagtaatgggaatatgctgcttgcctctccaatcgtagagctgaaggag
agaactaatcaaaatggtgccgttcttgcgtcagaccaacaacaaccgttgaagagttcg
gacttgtctgaagcaagccaaaacgccaaaagaaagagagacaattcaaaagaagaacaa
atattgtcacagaaagaacaggtgaccattctcacgaggggtttgccagagaccgttgtt
gccaaatgggacgaggaagtttcagcttctaagaagatgggaagtagtgaaggcacgaga
attggatatgtagcagatgaatgggatgaagaatatgacagagggaagaaaaagaagata
cggatcaaagaggagatgtatgtagggccgaacccgttccaggcgtttgcatcgaagaaa
caacaaacggatacaaagaagaaatggtcacaaggcaggaatactgcaaagacaggcttc
cggatatga
DBGET
integrated database retrieval system
