Brassica rapa (field mustard): 103856687
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Entry
103856687 CDS
T03449
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103856687
09122 Translation
03015 mRNA surveillance pathway
103856687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103856687
Spliceosome [BR:
brp03041
]
Complex A
Other components
Complex A specific factors
103856687
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
103856687
NCBI-ProteinID:
XP_009132050
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Position
A03:5095132..5098521
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AA seq
396 aa
AA seq
DB search
MSGKYNQDGGGGAPIPSYGGDGGYGGGDAGYGGRSASGGRGGYGGGGRGNNRGGGGYQGG
NRGGRGGGGGRDGDWPCPNPSCGNVNFARRVECNKCGAPAPSGTGDRGGGRGASDRGGGG
RDSGSRSYESSSSRYGGGSRSRGDSGSYGSNSQHRDNSSYGQGPPPPPLAAIPSYDGSGS
YPPAMGYGMEAVPPPSSYAGGPPSYGGPTGGYGVDAPRGGRGGGYDAPRRQESSYGDAPA
EKVKQCDANCDETCDNARIYISNLPPDVTVDELKDLFGGIGQVGRIKQKRGYKDQWPYNI
KLYTDEKGKNKGDACLAYEDPSAAHSAGGFFNNYEMRGNKIGVTMAEKSAPKAPAFDQRG
GGGRGGGGYGGGDRRRDNYGSGPDRNHHGGNRSRPY
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtaagtacaatcaagacggcggcggcggtgcgcctattccgtcgtacggtggt
gatggaggttatggaggcggtgatgctggatacggaggacgcagtgcctctggcggacgc
ggtggttacggcggtggcggtagaggaaacaaccgtggcggtggtggatatcaaggaggc
aatcgcggtggaagaggaggtggcggcggcagagatggtgattggccttgccctaatcca
agttgtgggaacgtgaactttgcaaggagagttgaatgtaacaagtgtggtgcgcctgct
ccttctggcactggggaccgaggaggtggccgaggggccagtgatcgtggtggtggtggt
cgtgatagtggtagtaggagctatgagagtagtagtagtagatatggtggtggcagtagg
agtagaggtgatagtggctcgtacggtagtaatagtcaacatagggataatagttcttat
ggtcagggtcctccacctcctcccttggctgctattccatcctacgatggttctggcagt
taccctccagccatggggtatggaatggaagcagttcccccgccttcaagctatgccggt
ggtcccccttcttatggtggtcccacagggggttatggtgttgatgcaccgaggggtggt
agaggtggtggctatgatgctcctcgacgccaggaatctagttatggagatgcacctgct
gaaaaagtcaagcagtgtgacgcgaattgtgatgaaacatgtgataatgccagaatatac
atctctaatttacctccggatgtgaccgttgatgaactcaaggatctctttggtggcatt
ggccaagttgggagaatcaagcagaagcggggttacaaagatcagtggccctataatatc
aagctttacactgatgagaagggaaagaataaaggtgacgcctgcctggcttatgaagat
cccagcgccgcacactctgcaggcggctttttcaacaattatgaaatgagggggaacaag
attggtgtaacgatggcagagaagtctgcgcccaaagcgcctgcttttgatcagagaggc
ggtggtggtagaggaggaggtggctatggtggtggagatagaagaagagataactatggt
tcaggaccagacagaaaccaccatgggggaaaccggtctcgtccatattga
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