Brassica rapa (field mustard): 103859443
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Entry
103859443 CDS
T03449
Name
(RefSeq) protein ELC
KO
K12183
ESCRT-I complex subunit TSG101
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03250
Viral life cycle - HIV-1
brp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103859443
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103859443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103859443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103859443
Membrane trafficking [BR:
brp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
103859443
Exosome [BR:
brp04147
]
Exosomal proteins
Proteins found in most exosomes
103859443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
DUF4624
DLP_helical
Init_tRNA_PT
Motif
Other DBs
NCBI-GeneID:
103859443
NCBI-ProteinID:
XP_009135230
UniProt:
M4CB71
LinkDB
All DBs
Position
A03:complement(17402063..17403465)
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AA seq
384 aa
AA seq
DB search
MVPSPLNPQQIQQFLSSVLSQRGPNSVPYDESTKWLIRQHLLNLISSYPSLEPKTATFIH
NDGRSVNLLQADGTIPMPYHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHV
TPSGLVSLPYLQNWVYPSSNLVDLVSDLGAAFATDPPLYSRRRPQPGPSPPPYETRPPPP
PPQTVDQRPFPPSPYGRVNHVHHQDDAAEVYKRNAINRMVEMVHGDLASMRRDREAEAES
MLSLQGGLKRREEEISRGMKEMVEEKETLEQQLQIVSMNTDVLDSWVRENQGKTNIDVDV
DKAFECVDALSKQMLECTASDLAIEDAVYALDKGFQDGVVPFDQYLRSVRLLSREQFFHR
ATGSKVRAAQMEAQVHAIAGRLHS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggttccgtcaccgttaaacccgcaacagatccaacaattcctctcctccgtcctctca
cagcgcgggcccaactccgtcccctacgacgaatccaccaagtggctaatccgccaacac
ctcctcaacctaatctcctcctacccttccctcgagcccaaaacggcgacgtttatccac
aacgacggccgttccgtaaacctcctccaagctgacggaaccatcccgatgccttatcac
ggcgtcacctacaacatccccgtcatcatctggctcctcgagtcctaccctcgccaccct
ccttgcgtctacgtgaaccccaccgccgacatgatcatcaaacgtccccacgcgcacgtg
accccctcgggcctcgtgtctctcccttatctccaaaattgggtttaccctagctccaat
ctcgtggatctcgtctccgatctcggcgccgccttcgctaccgatcctcctctctactcc
cgccgccgtcctcagccggggccatcgccgccgccgtacgagacgcgtcctcctcctcct
cctcctcagacggttgatcagagaccgttcccgccgtctccttacggcagagtgaaccac
gttcaccaccaggacgacgcggcggaggtttacaagagaaacgcgatcaacaggatggtg
gagatggttcacggcgatctagcgtcgatgcggagagatagagaagccgaggcggagtcg
atgctgagtctccaaggaggtttgaagaggagagaggaagagatcagcagagggatgaag
gagatggtggaggagaaggagacgctcgagcagcagctacagatcgtatccatgaacacc
gacgttcttgattcttgggttagagagaatcaagggaagactaatatcgatgttgatgtt
gataaggcctttgagtgtgtggacgcgctctctaagcagatgttggagtgtactgcttcg
gatttggctattgaagatgcggtttacgcgttggataaggggtttcaggatggggttgtt
ccgtttgatcagtacttgaggagtgtgaggttgctttcgagggagcagttctttcatcga
gccacggggtctaaagttagagctgcgcagatggaagctcaggttcatgccatcgcaggt
agattacattcgtga
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