Brassica rapa (field mustard): 103863649
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Entry
103863649 CDS
T03449
Name
(RefSeq) chromatin modification-related protein EAF1 B-like isoform X1
Organism
brp
Brassica rapa (field mustard)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HSA
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
103863649
NCBI-ProteinID:
XP_018514090
LinkDB
All DBs
Position
A04:6295909..6305418
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AA seq
1764 aa
AA seq
DB search
MQVVSGYPVVNAEVDSMEGGGLSDTGAAAIQKAQADLRLEYHVREERRRELEFLENGGNP
LDFKFGYATSQSVQSTSLIDKQAVKRGVKDSTASPPGDSVESSGRLGVSEPNTADNLLLF
DSDNKSLEGDRNSQYPNKRSRTSESQRSLKVNHSRDKKETEDSAIFRPYARRNRSKINRD
PARASSTELVQSRGGLATSLSLRKESVDVKGSDSEPGNHKTRQVPCPTSNGNPLLKDVVP
GNLFKTQDDEMVVRESTAATENSPVEEKVNIAYGETGLTGVKAHAVSASTVMDSLSAGCQ
ETNSSQLNGLKDPRGEKECSKDSAAVEAKRLDRESSHANDVEVDVHTKVDLHRVDKSDSN
SMPLQNASRVDEILDPTVCEMVNTKRDEAGESTIIISEQKSGYRSQSKSLKVENQDHTST
VEIKWSETESKQEDDLAIPQNDIKVTSGLADASDSSLWPITSQAAIETSPCRVRKNVLPD
TGSTALEDQHSLDDSSRKANTLMEDSILEEARNIKEKRERIAELSLGTLPAEVRTRSQWD
FVLQEMAWLANDFAQERLWKMTAAMQICHRAAFTSQLKFEDRIQQRNLKSLASTLANDVL
QFWNSVEVLREQEETSLETNTETVKEFKSDSGDKRPASGVREYARRFLKFMKSSTPHLQA
AAPSTPEHMCDPGIAETSWDDQLTEESLFYSVPSGAMEAYRGSIESHLVLCEKSGSSIQE
EVETSAYDPAEDTGYNGYDEDDEETSSYYMPGALRYRKSNNLTHKKRKNSMKYHSARSYD
HGADLPHGSYTGGSNPLMDKRPASNLNVGSVLMKRNRTASRHRIVSGDTSGDTSSFQDEQ
SSLNGGSAVQKGTEVESSRNFEKQLPYDMAETSDKPKNKGSAYEQSWHLDSMVHGEQEHR
KKRPQNQFNMNGLYGPHKKQKTVKQSLQNNFHTIPSPAASQMSNMSNPNKFLKFIGGRDR
GKKLKGLKISSGQHGSENPWTLFEDQALVVLVHDMGPNWELITDALKSTLKIKRIYRHPS
DCKERHRILMDKTGGDGADSAEDSGNSQAYPSTLPGIPKGSARQLFQRLQGPVEEDTLKS
HFETICSIGKKFHQRFIQNDCWDPKQIVPVHNSQVMALSHVFPNNLNGSVLTPLDLCDTS
TSGEDVFSLENSGLSTLPVLPVVPASEANPSSNNLSTTSSPTSASARFNIARGSLPPEEQ
HRIQQHNQTSSGRNRQQPSLSTPAAVSGPEPGPRPPGGNAASVNGTHRSSPLSRPGFQGV
STLPNSGSMLSSGMGGISNTGNNKSVGNSTLRPRGAMQHMMRAGKGNGLGIPALSSGFTN
QTIPSVQAYPGHLSQQHQLSQQPHVLGNSLNHHLQSPNRAAGTQQQALAAIRQRQMAQRY
LQQQQQFPAAGAMPPHALSSRPQVTPVSSPQSSPQSQPLASSQPLSMPPSSNMTAIGHQQ
PLKPQLPVHGLGRNPQSGASKVNNQAGKQRQRQTQQQTGKQHPLQRQPTLGQQQNKPLKG
GNIMHQSISVDDPSHLNGSTMSPGVQGTEKVEATVKAVPSQPSNLVTVVNTYTESKPLNP
PAVVTPAVAKPNHQNLLLHQKQGNQPLLTSHRTVHQSHDLLKQPPRDPQAVINTTQTASI
GVTKEVAPQASISSIPTVTVGSTAVNPPPKELDLPSCDSSEKNGVSKLSSSITNSSGSDP
VPDMAKDLGISDHGDKAVTERQQEQLRQSPPLVQRTPQLSEQLLVQNQKHIPSEQQKQQP
YLKTLELEAIHEKSTHRPPDTKVE
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggtttcaggatatcctgtagtaaatgccgaggttgattccatggaaggagga
ggacttagcgatactggagcagcagccattcagaaggctcaagcggacttaaggctggag
taccatgtccgcgaggaaaggaggagagaactggagtttctggagaatggtggcaaccct
ttggatttcaagtttggttatgctacttctcaaagcgtccaatctacttcgctcatagat
aagcaagcagtaaagaggggagtcaaggatagcactgcatcaccacctggtgattccgtg
gagagtagcggcagacttggagtttctgaacccaatacagctgataatctcttgctcttt
gattctgataataagtctcttgaaggagatagaaattcacaatatcctaataagaggagc
agaacttctgaatcgcaacggtctctcaaagttaatcattcccgggataaaaaggaaact
gaagattctgccatttttcgcccatatgctcgtagaaaccgatctaagattaaccgtgat
cctgcacgggcaagctctactgagttagttcagagtcgtggtggtcttgcaacgtctctc
tcacttcgcaaagagtctgtggatgtaaagggttctgattccgaaccaggcaatcataag
actaggcaagtaccttgtccaacttccaatggtaatccccttttaaaggatgtagtccca
gggaacttgtttaaaacacaagatgatgaaatggttgtacgagaaagcactgctgcaaca
gaaaacagtccagttgaagagaaggtaaatatcgcttatggagagactggtcttactgga
gtgaaagcacatgctgtctctgctagtacagtaatggattctctcagtgctggttgccag
gaaactaactctagccagttgaatggccttaaggatcccagaggagaaaaagaatgctca
aaagatagcgcagctgtagaggcaaaacggttagatcgagagtcctctcatgctaacgac
gttgaagtagatgtacatactaaagtagatctccatagggtggacaaatctgactccaac
agtatgcctttgcagaatgcttcaagagtagacgagatactagatcccacagtttgcgaa
atggtgaatacaaaaagagacgaggctggtgaatctaccatcattattagtgagcagaag
tctgggtatcgaagccaatcaaaatcgctcaaagttgaaaatcaagatcatacaagtaca
gtggagattaaatggtctgaaactgagagcaaacaagaagatgatttggcaataccgcaa
aatgatattaaagttactagtggattagctgacgcttccgacagctctttgtggcctata
acgtctcaggcagctatagaaaccagtccttgcagagtcaggaaaaacgtattgccggac
actggcagtacagcactagaagaccagcatagcttagacgatagctcaagaaaggcgaat
actttgatggaggactctatccttgaggaggcacgaaatataaaggaaaaaagagagagg
attgctgaattatctttgggtaccttaccagcggaggttcgtacgagatctcaatgggac
tttgtccttcaagaaatggcatggctggcaaatgattttgcgcaggagcgtctttggaag
atgactgctgccatgcagatttgccatcgagctgcttttacctctcagctgaaatttgag
gatcgaattcagcagagaaatctgaaaagcttagcttcaacattggctaatgatgtcttg
cagttctggaattctgtggaggtccttagggagcaagaggagacaagcttggaaactaat
acggagacagtgaaggaattcaagtccgatagtggcgacaaacgtccagcttctggtgtc
agagaatatgcacgcagatttttgaagtttatgaagtcgtctaccccccatctgcaagca
gcagcaccgtcgacacctgaacatatgtgtgaccctggcatagcggagacatcttgggat
gatcagcttacagaagaaagcttattttattcagttccatctggtgcaatggaggcctat
cgagggtccattgaatctcatcttgtcttgtgtgagaaatccggaagtagcatacaggag
gaggttgagacatcagcgtatgatccggcagaagatacaggatacaatggttatgatgag
gatgacgaagaaacgagtagctattatatgcctggagctcttagatataggaaatcaaat
aatttaacccacaagaaaagaaagaactcgatgaagtatcattctgcccggtcatatgat
catggggctgatttgccacacggtagctatactggtggctccaacccattgatggataaa
aggcctgccagtaatcttaatgttggttcagttttaatgaagcgaaatcgcactgcctcc
aggcataggattgtgagtggggacactagtggggacactagttcttttcaggatgagcaa
agtagtttgaatggtggatctgccgttcaaaaaggaacagaagttgaatctagtcgtaat
tttgagaagcagttaccttatgacatggctgaaacatcagacaaacctaagaataagggc
tctgcatatgaacaatcctggcatcttgattcaatggtacatggtgaacaggagcaccgg
aagaagagaccgcagaatcaattcaatatgaatggtctgtatggtccacataagaagcaa
aagactgtcaaacaatcactgcagaataattttcatactattccttctccggcagcttct
cagatgagcaatatgtctaaccccaacaaatttcttaagttcattggcggccgggacagg
ggcaaaaaattaaaaggcttaaagatttcttctggtcaacatggatctgaaaatccatgg
acactgtttgaggaccaggcgcttgttgtcctggtgcatgacatgggccctaactgggag
ctcattactgatgctttgaaaagcactcttaaaattaagcgtatatatcgtcatccaagt
gattgcaaggagcggcataggattctaatggacaaaactggtggtgatggggctgatagt
gctgaagactcgggaaattctcaggcttatccatccactttgcctggcatcccaaaggga
agtgcgagacagttgtttcaacgcttgcaagggcccgtggaagaagatacactgaagtcc
cattttgagacgatttgttcgattgggaagaaatttcatcaaagattcatacagaatgat
tgttgggatcctaagcagatagtaccagttcacaattctcaagttatggctctttctcat
gtatttccaaataatctgaatggaagtgtcctcacgccccttgatctctgtgatacatca
acgtcaggtgaagatgtattttcacttgaaaattcaggtctctcaacgctgccggtgtta
ccagtggttcctgcatctgaagcaaatccttctagcaacaacttgtcaactacatctagc
ccaaccagtgcgtcagcaagattcaatattgctagaggatcgttgccaccagaggagcaa
caccgaatccaacaacataaccagacgtcatccggtagaaaccggcagcagccttcttta
tcaactccagcagctgtctcaggacctgaacctgggcctcgcccacctggtggaaatgct
gcgagtgtaaatggaacccataggagctcaccgttgtcaaggcctggttttcaaggggtg
agcacattgccaaactctggcagcatgctttcctctgggatgggaggaatttcaaatact
ggaaataataaatctgtaggaaactctacgttaaggccccgtggagccatgcagcatatg
atgcgggctggcaaagggaatggtctggggattccggctttgagttctggatttaccaat
caaacaattccctcagttcaggcctatccaggccatctttcccagcagcatcagctgtcg
caacagccgcatgttcttggcaactcacttaatcatcatctccagagtccaaatcgtgca
gctgggacacagcagcaagcgttagctgctattcgtcaaagacaaatggctcagcgatat
ttgcagcagcagcaacagtttccagcagccggtgctatgccgccacatgcactttcatca
cgacctcaagttactcctgtatcttctccacaaagcagtcctcaatcgcaaccacttgct
tcgtctcagccattatcgatgcctccgtcgtcaaatatgacagcaattggacatcagcaa
cctctaaaaccgcagttaccggttcatggtctgggtaggaatcctcagtctggtgcttca
aaagtaaacaatcaagctggaaaacagcggcagcgacaaacccagcagcaaactggaaaa
caacatccactccaacggcaaccaactcttggtcagcagcaaaataaacccttgaaagga
ggaaacatcatgcatcagagtatctctgttgatgatccttcgcacttaaatggttctact
atgtcccctggcgtacagggtactgaaaaagtagaggcgacggttaaagctgtgcctagt
cagccatccaacctagtgactgtagtgaacacatatacagagtctaaaccactgaatcct
ccagcagttgttacaccagcagttgcaaaacccaaccatcaaaatttgctgctacaccaa
aagcagggcaatcagccgctactaacatctcatagaaccgttcatcaaagtcacgacttg
ttgaagcagccccctcgcgacccacaggctgtcatcaataccacccaaacagctagtatt
ggtgttacaaaggaggttgcgcctcaagcgagtattagttcgatacccacagttacagtt
ggttctactgctgtcaatcctcctccgaaagaattggacttaccatcgtgcgactcctcg
gagaagaacggtgtttctaaactaagcagttctattacaaattcatccgggagtgaccca
gtaccagatatggcgaaagacttaggcatttcggatcatggtgacaaggctgtaacagaa
agacaacaggaacagctacgacaatctccacctttagttcaaaggacgccacagttatca
gaacaattgcttgttcaaaatcaaaaacatattccttctgaacagcagaagcagcagcct
tatcttaagacgctggaattagaagcaatccatgaaaagtcaactcacaggcctcctgac
accaaggtggaatga
DBGET
integrated database retrieval system
