Brassica rapa (field mustard): 103864202
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Entry
103864202 CDS
T03449
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103864202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103864202
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103864202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
DUF445
Motif
Other DBs
NCBI-GeneID:
103864202
NCBI-ProteinID:
XP_009140235
UniProt:
M4D5G6
LinkDB
All DBs
Position
A01:931505..933912
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AA seq
487 aa
AA seq
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MSSFNLFSTPQQPQQQTTTPSPFQTQSFQPQTNSFFSQPPQQQQQTPSFQPQQFQQQQQQ
QQQVQQLYLFTNDKAPASYGTKWADLHPDSQKLLLQIEGKVLEYRSESQRLDQCSRLYDS
SVSTEGFEFDASRIVQELGGINTTMDRQKAVLHELMVVVKDMLRDSEVAVRSFIMLQPRF
PQSKPAGGGGVVGGGGSQSSQGANQAPASSGHQQQGVASVVQVSDFYRGVPRKPTVFLQQ
TVARFEKYLGECRQWVEELEQLLALDSDKFSRHVSLLESLPKVISNVHDFFVHVAAKVEN
IHQYIESMRTAYLADQRRRGECHDPFLEADRRETAKQEAAAKRVHPTLHLPANTATSTQT
STQVAGLITSSNAPPTSSAFPTPNPSSGGGLFLSTPASAAPATSLFATPSSAAPSSSLFG
AATTPSQTPLFGSSPAPAFGSAPSLFGQPTPSIAATPSQFAGITPGSGASFGSMTKSSRP
KSRTSRR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttcaatctattctccaccccacaacagccccagcaacagacaacaactcct
tctccctttcaaactcaatcgtttcagccgcagaccaactccttcttctcccaacctcca
cagcagcagcagcaaacgccgtcgtttcagccgcaacagttccaacagcagcaacaacaa
caacagcaagtacagcagctgtatctcttcacgaacgacaaagctccggcgagttatggc
accaagtgggccgatcttcaccccgattctcaaaaactcctccttcagatcgaagggaag
gtattggagtacagaagcgagagtcagaggttagaccaatgcagtcgtctttacgattcc
tctgtttcaaccgaagggttcgagtttgatgctagccgcattgttcaggagcttggtggg
attaacactacaatggacagacagaaagctgttctccacgagcttatggtggttgttaaa
gacatgctgcgtgattccgaggttgctgttcggtctttcatcatgctacagccaagattc
cctcaatctaagccagctggaggaggaggagttgttggtggtggtggttctcagtcgtct
cagggagctaaccaggctccagcttcttctggtcatcaacaacaaggagttgcttctgtt
gttcaagtttctgatttttaccgtggggttccgaggaagcctactgttttcttacagcag
acggttgcgaggtttgagaagtatctaggcgagtgtagacagtgggttgaggagctggag
cagctgcttgctttggattccgacaagtttagtcggcatgtttctcttttggagtctctt
ccgaaagtcatctctaacgtccatgacttctttgttcatgtcgctgctaaggttgagaat
attcaccaatacattgagtcgatgaggacggcgtatcttgctgaccagcggcggagagga
gagtgccatgatccgtttcttgaggctgatcggagggaaacagcgaaacaagaagctgct
gctaaaagggtccatccaactctgcatctacctgctaatactgctacaagtacacaaacc
tcaactcaagtagctggattgattaccagctcaaatgctccaccaacatcttcagccttt
ccaacaccaaacccttcttcaggaggtgggttgtttcttagcacgcctgcttctgctgca
cctgcgacttctctctttgctacaccatcttccgctgctcctagctcttctttgtttgga
gcagcaactactccttcgcagacaccactctttggttcttcaccagctcctgcatttggt
tctgctccgtctttgtttggacagccaactccatctattgctgctactccttcacagttt
gcaggtattacaccgggttcaggagccagcttcggttctatgactaaatcttcaaggcca
aaatctagaacttcccgccgttag
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