KEGG   Brassica rapa (field mustard): 103865862
Entry
103865862         CDS       T03449                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103865862
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103865862
   03041 Spliceosome [BR:brp03041]
    103865862
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103865862
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103865862
Spliceosome [BR:brp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103865862
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM Cut8 Cas_Cas6_C
Other DBs
NCBI-GeneID: 103865862
NCBI-ProteinID: XP_009141969
UniProt: M4DKC5
LinkDB
Position
A04:20186702..20189822
AA seq 440 aa
MADKKRKLEAQSNDASEPPQKQQQQLENGDEEITTEIHENENENQRPDEDDDQEPIEDLL
EPFSKEQLSILLKEAAQKHPDVADRIRIAADEDPVHRKIFVHGFGWDTKADALIKAFKQY
GEIEDCKCVVDKGTGQSKGYGFILFKSRSGARSALKQPQKKIGTRMAACQLASMGPVQGG
NSAAAAAAGATSQHFNPEHVQRKIYVSNVSADIDPERLLEFFSRFGEVEEGPLGLDKATG
RPKGFTLFVYKTAESAKKALEEPHKSFEGHVLHCHKANDGPKPVKQQHQNQHQHRHSSYD
QGSRYRRDDNAGYGATGGHGHYLAGNNQAAALNPAIGQAITALLASQGAGVGMNQAFGQA
LLGTLGAPSPGTGGGMPSGYGGQANITPGVFPGYGYEASFQGGYQTQLPGQGGYQTQQPG
QGSAGRGQHGLGYGGQYMGQ
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggctgataagaagagaaagctcgaagctcaatccaacgacgcctcagagccgccgcag
aagcagcagcagcagctcgaaaacggcgacgaagaaatcaccacagagatccacgaaaac
gaaaacgagaatcaacgccccgatgaggacgacgaccaagagccaatcgaagatctcctg
gaaccgttctcaaaggaacagctctcgattctcctcaaggaagctgctcaaaagcacccc
gacgtcgccgatcggatccggatcgcggcggacgaggatccggttcaccgcaagatcttc
gtccacggattcggatgggacacgaaggccgacgcgctcatcaaagctttcaagcagtac
ggagagatcgaggactgcaaatgcgtcgtcgataagggcacgggacagtccaaaggttac
ggctttattctcttcaagtcgcgttcgggcgctcgcagcgctctcaagcagcctcagaag
aagattgggactcgtatggctgcgtgtcagttagcttccatgggacctgtccagggaggg
aactctgcggcggcggcggcggcgggggcgacgtctcagcattttaaccctgagcatgtg
cagaggaagatctatgttagtaacgttagtgctgatattgatccggagaggttgttggag
tttttctctaggtttggggaggttgaggaaggtcctttggggcttgataaagctactggg
aggcctaaaggtttcactttgtttgtttataagactgcggagagtgctaagaaggcgttg
gaggagccgcataagagctttgaaggccatgttttgcattgccataaggcgaacgatggg
cctaagcctgttaagcagcagcatcagaatcagcatcagcatcgacatagctcttacgat
caaggttcgcgttaccgaagggatgataacgctggttatggtgcaactggaggccatggg
cattacttagctggtaacaaccaagctgcggcactaaacccagccattggccaggccatc
acagctttgttggcgtcgcaaggtgctggagtgggtatgaaccaagcatttgggcaggct
ttgttggggactttgggggcgcctagcccaggaactggaggtggaatgccaagtggctat
ggtggtcaagcgaatatcacaccaggggtgtttcctgggtacggttacgaagccagtttt
cagggaggttatcagactcagcttcctggtcaaggcggttatcagactcagcaacctggt
cagggtagtgctggaagagggcagcatggtttagggtatggtggtcagtacatgggtcaa
tag

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