Brassica rapa (field mustard): 103866371
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Entry
103866371 CDS
T03449
Name
(RefSeq) fumarate hydratase 1, mitochondrial
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00020
Citrate cycle (TCA cycle)
brp00620
Pyruvate metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
brp01200
Carbon metabolism
Module
brp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
brp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
103866371
00620 Pyruvate metabolism
103866371
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
103866371
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
103866371
NCBI-ProteinID:
XP_033148022
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All DBs
Position
A05:complement(215203..218628)
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AA seq
492 aa
AA seq
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MAIYVASRRLSARTTAATLRYATALRSYSTSFREERDTFGPIQVPSDKLWGAQTQRSLQN
FEIGGERERMPEPIVRAFGVLKKCAAKVNMEYGLDPTIGKAIMQAAQEVAEGKLNDHFPL
VVWQTGSGTQSNMNANEVIANRAAEILGRKRGEKCVHPNDHVNRSQSSNDTFPTVMHIAA
ATEINSRLIPSLKTLHTTLDSKSFEFKDIVKIGRTHTQDATPLTLGQEFGGYATQVKYGL
NRVTCTLPRLYQLAQGGTAVGTGLNTKKGFDVKIAAAVAEETNLPFVTAENKFEALAAHD
ACVETSGSLNTIATSLMKIANDIRFLGSGPRCGLGELVLPENEPGSSIMPGKVNPTQCEA
LTMVCAQVMGNHVAVTVGGSNGHFELNVFKPVIASALLHSVRLIADASASFEKNCVRGIE
ANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGSTLKEAALKLGVLTSEEFDT
LVVPEKMIGPSD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttacgtcgcgtcacggcggctttccgccagaacaaccgcggcgacgctgcgt
tatgccactgctctgagatcttattcgacctcgttcagggaggagagggacaccttcggc
ccgatccaagttccttccgataagttgtggggagcccagacgcagagatcgctgcagaac
ttcgagatcggcggcgagcgcgagcgaatgcccgagccaatcgtccgcgcttttggcgtc
ttgaagaagtgcgctgccaaggttaacatggagtatggacttgatccaacgattgggaaa
gcgattatgcaagctgctcaggaagttgctgagggcaagctcaatgatcatttccccctt
gttgtttggcaaactggtagtggcactcagagtaacatgaatgctaatgaggttattgcc
aacagagcagctgagattcttggtcgcaaacgtggtgaaaaatgtgtccaccctaatgac
catgtcaacagatctcagtcttctaacgacactttccctaccgtcatgcacattgcagct
gcaaccgagattaattcgaggctcatccctagtctgaaaactttgcataccactctcgac
tctaagtccttcgagtttaaagatattgtgaaaattggaagaactcacactcaagatgct
actcctttgacgctaggacaagaatttggtggctatgctactcaggttaagtatggactt
aatcgagtcacatgcactctaccccgcctctatcagcttgcacaaggtggaactgcggtc
gggacaggattaaacaccaagaaagggtttgatgtaaagatagctgctgcagtagccgaa
gaaacaaacctgccgtttgtcactgcagaaaacaagtttgaagctctggctgcacatgat
gcttgtgttgaaaccagtgggtcactcaacacaatcgccacatcgttgatgaagattgcc
aatgatatacgttttcttggaagtggtccaagatgtggtcttggtgaacttgttctgcct
gaaaatgagccaggaagcagcatcatgcctgggaaggtaaatcctacacagtgtgaggcc
ttgactatggtttgtgctcaggtaatgggcaaccatgtagctgtgacagttggtgggtca
aatggtcatttcgaactgaatgtatttaagccggtgattgcaagcgctctcttgcattcc
gtgaggttaatagcagatgcttcagcttcgtttgagaaaaactgtgtaaggggtattgag
gccaacagagaaaggatctcaaagctattgcacgagtctcttatgcttgtgacatcattg
aatccgaaaatcggatatgacaatgctgcagcagttgccaagaaagctcacaaagaagga
tcgacactgaaggaagcggctctgaagttaggtgttcttacttctgaagagtttgatacc
cttgttgttcccgagaagatgatcggtccctccgattga
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