Brassica rapa (field mustard): 103868210
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Entry
103868210 CDS
T03449
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
KO
K12890
serine/arginine-rich splicing factor 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103868210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103868210
Spliceosome [BR:
brp03041
]
Common components
Common spliceosomal components
SR proteins
103868210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
103868210
NCBI-ProteinID:
XP_033139976
LinkDB
All DBs
Position
A02:16443696..16446636
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AA seq
295 aa
AA seq
DB search
MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDPRDADD
AIHGRDGYDFDGHCLRVELAHGGRRSSNDARSSGSRGGGRDGGDRGRGPSRRSEFRVLVS
GLPSSASWQDLKDHMRKGGEVCFSQVYRDGRGTTGIVDYTSYEDMKYAIKKLDDTEFRNA
FSRGYVRVREYDSRRDSRSPSRGRSYSKSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPR
SRSKSRSPPPRGSRSRSRSPLPSVQKEASKSPSKLSQAKSPMRSRSKSRSRSPSR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgttcgagtagaactatatacgtggggaaccttccaggcgatatacgcgag
agagaggttgaagatttgttcagtaagtatggacctgttgttcaaatcgacctgaagatc
ccaccaaggcctcctggctatgccttcgtcgagtttgaggatcctcgggatgctgatgat
gctattcatggccgtgatggttatgactttgacggccattgtttacgggtggagctagca
catggtgggaggcgttcatctaatgatgctcgtagtagtggcagtcgtggcggaggtcgt
gatggtggagaccgtgggcgtggaccatctaggagatctgagttccgtgttcttgtatca
ggtttgccttcatctgcttcctggcaagacctcaaggatcacatgcgtaaaggaggagaa
gtctgtttctctcaagtctatcgtgatggtagaggtacaactggaattgtagattacacc
agctacgaggacatgaagtatgcgattaaaaagctcgatgacactgagtttaggaatgct
ttttctcgtggatatgtccgggttcgagaatatgattcaaggagggattcgagaagcccc
agccgtggaagatcttattctaagagccgcagccgtagccgcagcagaagcaggagcagg
agcccaaaggctaaatcttcgcgtagatcgcctgcaaaatctacgtcaagatcccctcgt
tcccgctcaaagtcaaggtcaccacctccgcgaggatctcgttcaaggtcaagatctcct
ctgccttctgttcagaaggaagcaagtaagagccctagcaagctgagtcaagccaagagc
cctatgcgtagcaggagcaagagcagaagcaggagtccatctcggtaa
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