Brassica rapa (field mustard): 103868679
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Entry
103868679 CDS
T03449
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103868679
03036 Chromosome and associated proteins [BR:
brp03036
]
103868679
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103868679
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103868679
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
103868679
microRNA pathway
RISC loading complex
103868679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
103868679
NCBI-ProteinID:
XP_009145006
UniProt:
M4ETX2
LinkDB
All DBs
Position
A05:13143979..13150539
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AA seq
1111 aa
AA seq
DB search
MVRKKRTDGPSEGGEGSGSRAAPASGGGRGGYQQGRGGGGGGQQQGGRGYSPQSQQGGRG
GGRGYGQPQQQQYGGPREGHPPQQQQQQQYGGPRGGQPPQQQQYGGPRGGQPPQQQQYSG
PRGGQPPSQQQYGGSREGQPPQQQHQQYGGPRGGPPRGGGRGGASSAGLPQRQSVPELHQ
ATLPTYQAVSSQPTPAEVSPTQMPDPPAPVQEFEQLSIEQGAPSQAIQPIPSSSKACKFP
LRPGKGQFGKRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMKQLVDLYRETH
LGRRLPAYDGRKSLYTAGPLPFVSKEFRILLQDEEEGAGGQRREREFKVVIKLAARADLH
HLGLFLQGKQADAPQEALQVLDIVLRELPTSKERYTPVGRSFYSPDIGRKQSLGDGLESW
RGFYQSIRPTQMGLSLNIDMSSTAFIEALPVTEFVCELLNRDIRSRPLSDADRVKIKKAL
RGVKVEVTHRGNMRRKYRISGLTAVATRELTFPVDERNTQKSVVEYFYETYGFRIQHTQL
PCLQVGNSNRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQEREKDILRTVGL
NDYDHDPYAKEFGIKISASLASVEARILPPPWLKYHDSGREGTCLPQVGQWNMMNKKMIN
GGTVSNWICVNFSRQVPDNLARTFCQELAQMCHTSGMAFNPEPVLPPVSARPEQVEKVLK
TRYHDAMAKLSKGKEIDLLIVILPDNNGSLYGDLKRICETELGIVSQCCLTKHVFKMSKQ
YMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVV
ASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKP
LRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAHNHN
DRNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGL
QSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMG
GRNTRGGPHVNAAVRPLPPLKDNVKRVMFYC
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagagaactgatggtccatctgaaggaggtgaagggtctggttcccgt
gctgctccagcctcaggtggtggacgtggtggttatcagcaggggagaggaggaggcgga
ggaggacagcagcaaggtggaagaggctatagtcctcagtctcaacagggaggtcgtggt
ggtggtcgtggatatggccaaccacaacagcagcagtacggtggtcctagagaaggccat
ccaccacaacagcagcagcagcagcagtacggtggaccaagaggtggccaaccaccacaa
cagcagcagtacggtggaccaagaggaggtcaaccaccacaacagcagcagtacagtgga
ccaagaggaggccagccaccatcacagcaacagtatggtggttcaagagaaggccagcca
ccacaacagcagcaccaacagtacggtggaccaagaggaggacctcctcgtggtggtggc
cgtggaggtgcatcctctgctggactgccgcagagacaatcagttcccgagctgcatcaa
gctaccttaccaacttatcaagcggtgtcttctcagcctacaccggctgaggtgagtcct
actcagatgccggatcctcctgctccggtacaagaatttgaacagctctctattgagcaa
ggagctcccagccaagcaatccagcccattccatcttccagcaaagcttgtaagtttcca
ctgaggcctggtaaaggacagtttggcaagcgatgcattgtaaaggccaaccacttcttt
gccgagttacctgataaagatttgcaccagtatgacgtaaccattactccagaagttaca
tcaaggggtgtcaatcgtgctgtgatgaaacagttggttgacttgtatcgtgaaacacat
cttggaaggcgtcttcctgcatatgatgggcgaaaaagtctgtacactgctggaccgctt
ccgtttgtttcgaaagaattcagaatcttacttcaggacgaggaagaaggggctggggga
caaagacgagaaagggagttcaaagttgtgatcaagctagctgcccgtgctgatctacat
cacctaggattgtttttacaggggaagcaagctgatgccccgcaggaggctcttcaggtt
cttgacattgttcttcgtgagctgccaacttcaaaagagaggtatactcctgtgggccgg
tcattttattctccggatataggaagaaagcaatcattgggtgatggcctggagagctgg
cgtggattctatcaaagcattcgtcctacacagatgggcttgtccctcaacattgatatg
tcatctacagcattcatagaggcacttcctgttaccgaatttgtctgcgagttgctgaat
agggatattagatcccggcctttatccgatgctgatcgtgtcaagataaaaaaggcgctt
agaggtgtgaaggttgaagtgacccatagaggaaacatgcgccgaaagtatcgcatttcg
gggctgaccgccgtggccactcgagaactgacatttcctgtggatgaaagaaatacccag
aaatctgttgttgaatacttctacgaaacatatggctttcgcattcagcacacgcagcta
ccatgcttgcaagttgggaattctaacaggccaaattatttaccaatggaggtctgcaag
attgttgagggacagaggtactcaaaaaggttgaacgagagacagatcactgctcttctg
aaggtgacttgtcagcgcccccaagaacgtgaaaaagatatcttgcggacagtagggctc
aatgattatgatcacgatccctatgctaaggagtttggaatcaagataagcgcatccctt
gcttctgttgaggctcgaattctgcctcctccatggctcaagtatcatgattctgggagg
gaagggacttgtctgccgcaagttggacagtggaatatgatgaataagaaaatgataaat
ggcggtacagtgagcaactggatttgcgtcaacttctctaggcaagttcccgacaatttg
gcacgtactttctgtcaggaacttgctcagatgtgccacacctctgggatggcatttaat
ccggaaccagtccttccaccagtcagtgctcgccctgagcaagtcgagaaagtcttgaaa
actcgatatcatgatgccatggccaagctctctaaaggaaaagagattgatctccttatt
gtcattctcccagacaataatggatccttatatggtgatctgaagcgcatctgtgagacc
gaactcggcattgtgtctcagtgctgcctgactaagcatgtctttaagatgagcaaacag
tatatggctaacgtggctttgaaaattaatgtcaaagttggaggaaggaatactgtactt
gttgatgccttatctaggcgaattcctctggtcagtgatcgccccaccataatctttggt
gctgatgtaacacatcctcatcctggagaggactcaagcccgtccattgctgccgtcgtc
gcttcccaagactggcctgaaattacgaaatatgctggcttggtttgtgctcaagcgcat
agacaggagctcattcaggatctcttcaaagaatggaaggacccgcagaaaggggtagtg
accggtggcatgattaaggagttacttatcgccttccgtagatcaactggtcataagccg
ttaaggatcatattctacagggatggagtcagtgaaggacagttttatcaggttttgctc
tatgagcttgatgccatccgcaaggcatgtgcttcgctggaagcaggttatcagccacca
gtgacgtttgtggtggtgcagaagcgccatcacacaagactatttgctcataaccacaat
gaccgcaattcagtggacagaagtggaaacatattaccaggaaccgtcgtggattccaaa
atctgtcaccccactgagttcgacttttacctctgtagccatgctggtattcagggcact
tcccgacctgctcattaccacgttctttgggatgagaacaacttctctgcagatggactc
cagtctctgaccaataacttatgttacacgtatgcgagatgtactcgttctgtatccatt
gtgccgcccgcatactatgctcatctagcagcgttcagggctcggttctacatggagcca
gagacgtcagacagtggttcgatggctagcgggagcatggcacggggaggtggtatgggt
ggtagaaacacacgtggtgggccacacgtgaacgctgcagtgagaccactcccacctctg
aaagacaatgtgaagcgcgtgatgttctactgctga
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