KEGG   Brassica rapa (field mustard): 103871138
Entry
103871138         CDS       T03449                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103871138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103871138
   03041 Spliceosome [BR:brp03041]
    103871138
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103871138
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103871138
Spliceosome [BR:brp03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103871138
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 103871138
NCBI-ProteinID: XP_009147615
UniProt: M4FEZ2
LinkDB
Position
A06:879971..882318
AA seq 415 aa
MDMLKKRRLDENGNGILNDAHITRLTPHDARKLIERFSTDQLLDILQNAVARHPDVLELV
RSTADADITQRKLFIRGLAAETTTEGLRSLFSTYGDLEEAIVILDKVTAKSKGYGFVTFR
HVDGALLALKDPSKKIDGRVTVTQLAAAGNQGGGGAAAAANGSDVSMRKIYVANVPVDMP
ADRLLNLFLAYGEIEEGPLGFDKVTGKSRGFALFVYKSPEGAQSALADPTKVIDGKHLQC
KLAIDGKKGKPPGGGPGKDVAAGPGNGHGHGHGNGMGVAPPPGPYGPAVGGPGGMGGYNG
YSGGPPPHQMNHTPSSMGGGPGGYAGAYGGAYAGHYGGYGGPGSGGYGLGTGPGAGSGPY
RMPPSSMGGSGGYPESGHYGHSSASAYPGQHQPVGSSAAPRVPPGGMYPNGPPHY
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacatgttgaagaagcgaaggctcgacgagaacggcaacggtatcctcaacgacgcg
cacattacccgattgacgccgcacgacgcgaggaagctcatcgagcgattctccaccgat
cagctcctcgacatcctacaaaacgccgtcgctcggcaccccgacgtcctcgagctcgtc
agatcaaccgccgacgcggacatcactcagaggaagctctttatccgcggcctcgcggcg
gagaccacgacggaaggtctccgatcgcttttctccacctacggagacctcgaggaggcg
atcgtgattctcgataaggtgacggcgaagtcgaaggggtacgggttcgtgacgtttagg
cacgtggacggggcgcttctcgcgttgaaggatccgtcgaagaagatcgacgggcgcgtg
acggtcacgcagctcgcggcggctgggaatcaaggtgggggtggtgctgcggcggcggcg
aatggttcggatgtgtcgatgaggaagatttatgtggcgaatgtgccggttgatatgcct
gcggataggttgttgaatctgtttttggcgtatggggagattgaggaaggtcctttgggg
tttgataaggttactgggaagtctagagggtttgctttgtttgtgtataagagtcctgaa
ggtgctcagtcggcgcttgctgatcctactaaggtgattgatgggaagcatttgcagtgt
aagttggctattgatggtaagaaggggaagccaccaggtggtggtccgggtaaagatgtt
gctgctgggcctgggaatggtcatggtcatgggcatggtaatggaatgggtgtggctcct
cctcctggaccttatgggccagctgttggtggtcctggtgggatgggtggttacaatggg
tactcaggaggaccgccaccgcatcagatgaatcacacaccatcatctatgggcggtgga
ccaggtggatatgcaggtgcgtatggaggtgcatatgctggtcattatggtggatacggt
ggtccaggatctgggggttatggtcttggtacaggccctggtgctggaagtggtccgtat
agaatgccaccgagttcgatgggtggtagtggtggttatcctgagagcgggcactatggg
cattcatcagcttcagcgtatcctggacagcatcagcctgttggttcctccgcagctccg
agagttcctcctggaggaatgtaccccaacggtccaccacattactga

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