Brassica rapa (field mustard): 103873481
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Entry
103873481 CDS
T03449
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103873481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103873481
03029 Mitochondrial biogenesis [BR:
brp03029
]
103873481
Membrane trafficking [BR:
brp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103873481
Atg1 complex
103873481
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103873481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103873481
NCBI-ProteinID:
XP_033128087
LinkDB
All DBs
Position
A06:17532029..17534386
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AA seq
563 aa
AA seq
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MDFPENLPSSSSDMGRLEQIVSHFFPKALHIVLDSRIPSLQSRGRTRDRNLKKSDKWFNL
IMGDRPAALDKLHSWHRNILDSMIIDIILIHPSHHDHAETVMERWVVQYENPLIMSPQSS
DPCTRYQKVYKKAIILLRSLYAQTRLLPAYRVSRQLSSSLASSGFEMVYKVSSFSPPVTE
TMTEFRFSPVEVPPGRLCASVTYRSDLSGFNLGAHITLPPRIITDYVGSPATDPMRFFPS
PGQSFEATSSFHGRAGRGPPPSPSERPHSWTSGFHRPPTPNQSFSPQFSPDFHCSRTEHQ
LSPPFSPSGSPRGSNSPRINLRPGTAPVTIPSSATFNRYVSSNFSEPTRNPLPPFSPKST
RRSPSSQDSLPGIALYKSSRSGESPSGLINHYPAHKLTKESKYDSGRFSGLLSSSGSPRF
GFSRSPSRLSSDLEDPDCSCPFDFDDVDESSAGLQYSQSLDRRKTSSSISQSLPIGRKSQ
DAAVGVLVQMLKTAPPLRQDSSTYMASSMSGVQRQGSSVSGTESEFSMARTTSDALEELR
NYKQLKDLLLSKSKSVGGATRVH
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggattttccggagaatctaccatcatcatcatcagacatgggaagattagagcagatc
gtatctcacttcttcccaaaggcactgcacatcgtcctcgactccagaatcccttccttg
caatcccgtggccgtactcgcgaccgcaacctcaaaaagagcgacaaatggttcaatctc
ataatgggagaccggcccgccgcgttagacaagttacattcatggcataggaacatcttg
gattccatgatcatcgacatcatcctcatccatcccagtcaccatgatcatgccgagact
gtgatggagcgttgggttgttcaatacgagaatccgttgatcatgtcccctcaaagctcc
gatccttgcactcgttaccagaaggtttacaagaaagctatcattctcctgcgttctctc
tacgctcagacgcgccttctgcctgcctaccgtgtctccaggcagctgagttcctctctt
gcctcttccgggtttgaaatggtctacaaggtttcctctttctctcctcccgtcactgag
accatgacagagtttcgcttttcgcctgttgaagtccctcctggtcgtctctgcgcttct
gttacttaccgttctgacttgtctggcttcaatctcggtgcccacatcacattgcctccc
aggatcattaccgattacgttgggagtcccgccaccgatcctatgaggttcttcccttct
ccagggcagagctttgaagctacttcttcttttcatggtagagctggacgggggcctcct
ccctcaccttctgaacgtcctcatagctggaccagtggctttcacagacctcctacccca
aaccaatctttctcccctcagttttcacctgatttccactgctcacgtaccgagcaccag
ctttcccctcctttttcgccatcaggttctccaagagggagtaacagtccgaggattaat
ctgaggcctggcactgctccagtgaccattccttcttctgctacgttcaatagatacgtg
tcatctaacttctctgagccaactaggaatccacttcctcccttttcccctaaaagcacc
agacgctccccttcatcccaggactctctccctgggattgctttgtacaagagttccaga
agcggagaatctccttctggactaattaaccactaccctgcccacaagctgacaaaggaa
agcaaatacgattcaggccggttctctggactgctgtcttcaagtggctcaccaagattc
ggcttttctaggagcccgagtagattatcttcggatttggaggaccctgattgttcatgc
ccttttgatttcgatgatgttgacgagtcgtctgctggactccagtacagccaaagtctt
gaccggaggaaaacttcaagctctatatcacagtcgctacctatagggcggaagtcacag
gacgcagcggttggagtcctggttcagatgctaaagacagcaccgccattacgacaagac
tcgagcacttacatggcgtcatcaatgtctggtgttcagagacaaggtagttcagtgtca
ggtacagaatctgaattttcgatggctcgaactacatctgatgcactagaggagctcaga
aactacaagcagctcaaagacttgcttctctccaaatccaagagtgttggaggagcaact
cgtgtccactga
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integrated database retrieval system