KEGG   Brassica rapa (field mustard): 103873481
Entry
103873481         CDS       T03449                                 
Name
(RefSeq) autophagy-related protein 13a
  KO
K08331  autophagy-related protein 13
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:brp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    103873481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103873481
   03029 Mitochondrial biogenesis [BR:brp03029]
    103873481
Membrane trafficking [BR:brp04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    103873481
   Atg1 complex
    103873481
Mitochondrial biogenesis [BR:brp03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    103873481
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 103873481
NCBI-ProteinID: XP_033128087
LinkDB
Position
A06:17532029..17534386
AA seq 563 aa
MDFPENLPSSSSDMGRLEQIVSHFFPKALHIVLDSRIPSLQSRGRTRDRNLKKSDKWFNL
IMGDRPAALDKLHSWHRNILDSMIIDIILIHPSHHDHAETVMERWVVQYENPLIMSPQSS
DPCTRYQKVYKKAIILLRSLYAQTRLLPAYRVSRQLSSSLASSGFEMVYKVSSFSPPVTE
TMTEFRFSPVEVPPGRLCASVTYRSDLSGFNLGAHITLPPRIITDYVGSPATDPMRFFPS
PGQSFEATSSFHGRAGRGPPPSPSERPHSWTSGFHRPPTPNQSFSPQFSPDFHCSRTEHQ
LSPPFSPSGSPRGSNSPRINLRPGTAPVTIPSSATFNRYVSSNFSEPTRNPLPPFSPKST
RRSPSSQDSLPGIALYKSSRSGESPSGLINHYPAHKLTKESKYDSGRFSGLLSSSGSPRF
GFSRSPSRLSSDLEDPDCSCPFDFDDVDESSAGLQYSQSLDRRKTSSSISQSLPIGRKSQ
DAAVGVLVQMLKTAPPLRQDSSTYMASSMSGVQRQGSSVSGTESEFSMARTTSDALEELR
NYKQLKDLLLSKSKSVGGATRVH
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggattttccggagaatctaccatcatcatcatcagacatgggaagattagagcagatc
gtatctcacttcttcccaaaggcactgcacatcgtcctcgactccagaatcccttccttg
caatcccgtggccgtactcgcgaccgcaacctcaaaaagagcgacaaatggttcaatctc
ataatgggagaccggcccgccgcgttagacaagttacattcatggcataggaacatcttg
gattccatgatcatcgacatcatcctcatccatcccagtcaccatgatcatgccgagact
gtgatggagcgttgggttgttcaatacgagaatccgttgatcatgtcccctcaaagctcc
gatccttgcactcgttaccagaaggtttacaagaaagctatcattctcctgcgttctctc
tacgctcagacgcgccttctgcctgcctaccgtgtctccaggcagctgagttcctctctt
gcctcttccgggtttgaaatggtctacaaggtttcctctttctctcctcccgtcactgag
accatgacagagtttcgcttttcgcctgttgaagtccctcctggtcgtctctgcgcttct
gttacttaccgttctgacttgtctggcttcaatctcggtgcccacatcacattgcctccc
aggatcattaccgattacgttgggagtcccgccaccgatcctatgaggttcttcccttct
ccagggcagagctttgaagctacttcttcttttcatggtagagctggacgggggcctcct
ccctcaccttctgaacgtcctcatagctggaccagtggctttcacagacctcctacccca
aaccaatctttctcccctcagttttcacctgatttccactgctcacgtaccgagcaccag
ctttcccctcctttttcgccatcaggttctccaagagggagtaacagtccgaggattaat
ctgaggcctggcactgctccagtgaccattccttcttctgctacgttcaatagatacgtg
tcatctaacttctctgagccaactaggaatccacttcctcccttttcccctaaaagcacc
agacgctccccttcatcccaggactctctccctgggattgctttgtacaagagttccaga
agcggagaatctccttctggactaattaaccactaccctgcccacaagctgacaaaggaa
agcaaatacgattcaggccggttctctggactgctgtcttcaagtggctcaccaagattc
ggcttttctaggagcccgagtagattatcttcggatttggaggaccctgattgttcatgc
ccttttgatttcgatgatgttgacgagtcgtctgctggactccagtacagccaaagtctt
gaccggaggaaaacttcaagctctatatcacagtcgctacctatagggcggaagtcacag
gacgcagcggttggagtcctggttcagatgctaaagacagcaccgccattacgacaagac
tcgagcacttacatggcgtcatcaatgtctggtgttcagagacaaggtagttcagtgtca
ggtacagaatctgaattttcgatggctcgaactacatctgatgcactagaggagctcaga
aactacaagcagctcaaagacttgcttctctccaaatccaagagtgttggaggagcaact
cgtgtccactga

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