Brassica rapa (field mustard): 103875349
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Entry
103875349 CDS
T03449
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103875349
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103875349
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103875349
03036 Chromosome and associated proteins [BR:
brp03036
]
103875349
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103875349
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103875349
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103875349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
Adaptin_N
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
103875349
NCBI-ProteinID:
XP_009152111
UniProt:
A0A397Z357
LinkDB
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Position
A06:25766411..25770667
Genome browser
AA seq
587 aa
AA seq
DB search
MSMTDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVREKAVESLCRVGSQMKES
DLVEHFIPLVKRLAAGEWFTARVSACGVFHIAYPSAPDAVKTELRSIYTQLCQDDMPMVR
RAAATNLGKFAATIESAHLKTDVMSMFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNVKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPVVMTAAKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPGLVELSEDPDVDVRFFANEALQSIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaccgacgagccgctttaccccatcgctgtcctcatagacgagcttaagaac
gatgacattcagctaaggttgaattcgatcaggaggctttccacgatcgctcgcgctctc
ggcgaggagaggacgaggaaggagctgattccctttctgagcgaaaacaatgacgatgac
gatgaggtgctgcttgcaatggctgaagagttgggagtgtttattccttacgttggtggc
gttgagcacgcgcacgttctgcttccaccgttggagacgctctccacggttgaggagact
tgtgtgagggagaaagctgttgagtcgctttgtagagttgggtctcagatgaaggagagt
gacttggttgagcatttcattccgttggttaagagacttgcagctggtgagtggttcaca
gccagagtatcagcttgtggggttttccatattgcataccctagcgccccagatgcggtg
aagactgagttgagatcaatatatacccagctctgtcaagatgatatgccaatggtgcga
agagctgcagcaaccaatctggggaaatttgctgctactattgaatcagctcatttgaag
actgacgttatgtctatgtttgatgatcttactcaagatgatcaagattccgttagatta
ttggcggttgagggttgtgctgctcttgggaaattgttggagcctcaggactgtgttgcg
cacattcttcccgtcattgttaatttctcgcaggataagtcttggcgtgtgcgttacatg
gtagcaaatcagctttatgagctttgtgaagccgtgggacctgagcctactaggacggaa
ctggtgcctgcatatgtgcgtctacttcgtgacaatgaggctgaagtacgcatagcggct
gctggaaaagttactaagttttgtcggatcctaaaccctgaacttgctattcagcacatt
ctcccgtgtgtaaaggagctatcaacagactcatctcaacacgtcagatctgcattggcc
tcagttataatgggaatggctccggtcttgggcaaggatgccacaattgagcatctcctt
ccaatctttctttctctgttgaaagatgagtttcctgatgtacgcttgaacattatcagc
aaacttgaccaagtgaaccaggttattgggatagatctgctatcacaatccttgttgcca
gcaattgtagaacttgctgaagatagacactggagagtaagacttgctatcattgagtac
atacctttgttggcaagtcagttaggtgttggcttctttgacgataagcttggcgctctt
tgcatgcaatggttacaagacaaggttcactcaatccgcgaggctgctgcaaacaatgtg
aagcggcttgctgaggaatttggtcctgagtgggcaatgcagcatatagttcctcaggtt
cttgagatgatcaacaaccctcactatctataccgtatgaccattttgcgtgcggtttct
cttcttgcaccagtgatgggctcagagatcacatgctccaagctcttacctgtagtgatg
actgcggctaaagacagagttccaaacatcaaattcaacgtcgctaaggtgcttcaatcc
ctcattccaattgtcgatcaatcggttgtcgagaagacgattcgtcctgggcttgtggag
ctaagcgaggatccagatgttgatgttaggttctttgcaaacgaagctcttcaatctatt
gataatgtgatgatgtctagctaa
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