Brassica rapa (field mustard): 117130859
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Entry
117130859 CDS
T03449
Name
(RefSeq) uncharacterized protein LOC117130859
Organism
brp
Brassica rapa (field mustard)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
Retrotrans_gag
RT_RNaseH_2
Ty3_capsid
zf-CCHC
Asp_protease_2
gag-asp_proteas
zf-CCHC_3
RVP_2
Motif
Other DBs
NCBI-GeneID:
117130859
NCBI-ProteinID:
XP_033139353
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MGTEEDDATYMRRNKLLQEAITKQVMEDLVKLLDERYDQRAPGRQDQTTDHQQAPRRNGR
ERQEHAGSQETDNFYERDRARHSSASRHSSSSRHSSRRSRRDHEGRRYQRDELAGVKIKI
PPFHGKADPDAYLEWEKKIDLVFNCRRYSEAKKIQIAVTEFYDYALSWWDQLVTNRRRNG
EFPVETWAEMKALMRKRFVPSHYHRDLHQKLRKLTQGSRTVEEYYQEMELLMLRACISED
REATMARFLGGLNREIQDNVEMQHYLEMEEMLHKAILVEQQVKRKGHSRGNYGTKYQGAK
EDKPSHQKESKSYQKDEDKPTSSFSKDKGKAEASTTRSRDVKCFKCQGRGHYASECTNKR
VMILHDNGEYESTDEETEAEEDHSSEEEYVANPVAGRLLVARRTLSLQSKSEEMEQRENL
FYTRCLVQGKVCSLIVDGGSCVNVASETMVKKLGLKVQKHPKPYRLQWLNEEGEMRVSTQ
VIVPLAIGKYEDEILCDVLPMEAGHILLGRPWQSDRRVIHDGYANKHTFEFKGRKTVLVP
MTPKEVQVDQLQLQKKKEIDLPAESTKQLNFYAKSGDVKRSLCSNLPILLFIYKESLLTT
TDIAPEYPSELVSLLQEYQDVFPEDSPKGLPPVRGIEHQIDFVPGSTLPNRPAYRTNPVE
TKELQRQVEELMEKGHIRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPR
LDDMLDELHGSCIFSKIDLKSGYHQIRMKEGDEWKTAFKTKHGLYEWLVMPFGLTNAPST
FMRLMNHVLRSFIGLFVVVYFDDILIYSQSLEEHIDHLKTVLDVLRKEKLYANLKKCTFC
TDNLVFLGFIVGADGVKVDPEKVRAIQEWPIPKTVSEVRSFHGLAGFYRRFVKDFSTIAS
PLTEVIKKEVGFKWGEAQELAFQCLKEKLTHAPLLILPDFHKTFEIECDASSANLRAHYH
VHFNQEEAVCSIRLFNTSRGRRVHPGVQKLSAAVSHHPMSPLKKEDPRKQRQWSGLATLS
NKASSGFLLFKVQEEVSQEESLLLVLVWRVQHGERWELRHGGSKGKVDALGFKSKMQLRQ
KLKWPKYMRSVLCPSLIRVEEEDFAIDKAMEKDLCVWPVKIAQLVIVMCSWFMETHM
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgaagaagatgatgcaacgtatatgagaagaaacaaactcctacaagaagct
atcaccaaacaagtaatggaagacttggtaaagttgctagatgagagatacgatcagaga
gcccctggtagacaagaccaaacgactgatcatcagcaagcacctaggaggaatggacgt
gaacgacaagagcatgctggttcacaagaaactgataacttttatgaaagagatagggca
cggcacagctcggcttctagacatagctcttcctctagacacagcagtagaagatctaga
cgtgaccatgaagggcgtaggtatcaaagagatgagcttgctggagttaagatcaagata
cctcctttccatggcaaagccgatcctgatgcttatctagaatgggagaagaagattgat
ctagtcttcaattgtcggcgttattcagaagctaagaagattcaaattgctgttactgag
ttctatgattatgctttgagttggtgggatcaactagtcaccaatagaaggcgcaatggg
gaatttcctgttgagacttgggcagaaatgaaggctctcatgcgcaagagatttgtgcct
agccattaccaccgggatctccatcagaagctaagaaaactcacgcaaggctcacggaca
gtcgaagaatactatcaggagatggagttgttgatgttaagagcttgcatatctgaggat
agagaagctactatggcacggtttcttggaggactcaaccgtgagatacaagacaatgtg
gagatgcagcactacttggagatggaggagatgctacacaaagccattctagtggaacaa
caagtaaagagaaagggtcactctcggggcaactatggaactaagtatcaaggtgctaag
gaagataagccaagtcaccagaaagagagcaagtcatatcaaaaggatgaggacaaacct
actagttctttcagcaaggataaaggaaaagctgaagcctctactacaagatcaagagat
gttaaatgttttaagtgccaaggaagaggacactacgctagtgagtgcaccaacaaacgt
gtgatgatcctacatgacaatggagaatatgagtctactgatgaggagacagaggccgaa
gaagatcacagttcagaagaagagtatgttgccaacccggtcgctggaaggttgctagtt
gctagaagaaccttgagtcttcaaagcaagtccgaagagatggagcaaagagagaatctc
ttctatactagatgtctagtgcaaggaaaggtctgtagtcttattgtggatggaggcagt
tgtgtcaacgttgcgagtgagactatggttaaaaagttgggtttgaaggtccagaagcat
cctaaaccatataggctccaatggctcaatgaagagggcgagatgagagtttctactcag
gttattgttcccttagccattggtaaatatgaagatgagattctatgtgatgtgttgcct
atggaagcggggcacattctccttggaaggccgtggcaatcagatcgacgtgtgatacat
gatgggtacgccaacaagcacacctttgagtttaaagggagaaagacagttcttgtgcct
atgactcctaaggaagttcaggttgatcagctccaactacaaaagaagaaagagattgat
ctacccgctgaatcaaccaagcaactaaacttctatgccaagtctggtgatgttaaaaga
tctctctgctctaaccttcctattcttttgtttatctataaggaatcactcttgactact
actgatattgcaccggagtatccgagtgaacttgtatctcttttgcaggaatatcaagat
gtttttccagaagatagtcccaaaggactaccaccagtgcgagggattgaacaccaaatt
gactttgtgcctggttctacactccccaacaggccagcatacagaaccaatccggttgag
accaaagaactacaaaggcaagtggaggaactgatggagaaagggcatatccgagagagc
atgagcccttgtgctgttccagtactgcttgtgcccaagaaagatgggagctggcgcatg
tgtgttgattgtagagcaatcaacaatataacagtgaagtatcgccatcctattcctaga
ttagatgatatgcttgatgaattacatggttcatgcatcttttctaagatagatctaaag
agtggatatcatcagattaggatgaaagaaggagatgagtggaaaactgcctttaagact
aagcatgggttatatgagtggttagttatgccctttggattgactaatgcacctagtact
ttcatgagattgatgaaccatgtgcttaggtcttttataggtttgtttgtggtagtttac
tttgatgatatcctaatctacagtcagagtctagaagagcatatagaccatcttaagact
gttcttgatgtgttgagaaaagaaaaactttatgctaatcttaagaaatgtacattttgc
acagataacttggtctttttaggttttattgtgggtgcagatggggttaaagttgatccg
gagaaagtaagggctatacaagaatggccaatccctaagaccgtgagtgaagtaagaagc
ttccatggacttgctggcttctataggcgctttgtgaaagacttcagcaccattgcatct
cccttgactgaagtaatcaagaaagaagtcggattcaagtggggagaagcacaagaactt
gctttccaatgccttaaagagaagcttactcatgcccctcttcttatacttcctgacttt
cataaaacttttgaaatagaatgtgatgcctcttccgcaaacctcagagctcactaccat
gtccatttcaaccaagaagaagctgtctgttctatccggctgttcaacacctcaagaggc
agacgtgttcatcctggagtccagaagctgtctgctgctgtttctcatcatcccatgtcg
cccttgaagaaagaagacccaaggaaacaaagacaatggagcggattagctaccctctct
aacaaagccagttccgggttcttgctattcaaagtccaagaagaagtttctcaagaagaa
agcttgctgcttgtactggtgtggcgtgtacaacatggagaaaggtgggagctaagacat
ggtggttcaaaaggaaaggttgatgcacttggattcaagtctaagatgcagttaaggcag
aagttaaaatggcctaagtacatgaggagtgttctttgtccatcactaatccgagtagaa
gaggaagactttgccattgataaagcaatggagaaagacttgtgtgtatggccggttaag
atagcgcagctagtgatagtgatgtgctcctggttcatggagacacacatgtaa
DBGET
integrated database retrieval system
