Brassica rapa (field mustard): 41704059
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Entry
41704059 CDS
T03449
Symbol
rbcL, EXT18_pgp059
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00630
Glyoxylate and dicarboxylate metabolism
brp00710
Carbon fixation in photosynthetic organisms
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
brp01200
Carbon metabolism
Module
brp_M00165
Reductive pentose phosphate cycle (Calvin cycle)
brp_M00532
Photorespiration
brp_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
41704059 (rbcL)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
41704059 (rbcL)
Enzymes [BR:
brp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
41704059 (rbcL)
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Top1B_N_bact
Motif
Other DBs
NCBI-GeneID:
41704059
NCBI-ProteinID:
YP_009553775
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Position
CP
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AA seq
479 aa
AA seq
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MSPQTETKASVGFKAGVKEYKLNYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALAALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL
NATAGTCEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRLSGGDHVHAGTVVGKLEGDRESTLGFVDLLRDDYVEKDRSR
GIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLAVEGNEIIREACKWSPELAAACEVWKEITFNFPTIDKLDGQD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagagactaaagcaagtgttggattcaaagctggtgttaaagagtat
aaattaaattattatactcctgaatatgaaaccaaggatactgatatcttggcagcattc
cgagtaactcctcaacccggagttccacctgaagaagcaggggctgcggtagctgctgaa
tcttctactggtacatggacaactgtgtggaccgatgggcttaccagccttgaccgttac
aaaggacgatgctaccacatcgagcccgttccaggagaagaaactcaatttattgcgtat
gtagcttacccattagacctttttgaagaagggtctgttactaacatgtttacctcaatt
gtgggtaacgtatttgggttcaaagccctggctgctctacgtctagaggatctgcgaatc
cctccggcttatactaaaactttccagggaccacctcatggtatccaagttgaaagagat
aaattgaacaagtatggacgtcccctattaggatgtactattaaacctaagttggggtta
tccgcgaagaactatggtagagcagtttatgaatgtctacgtggtggacttgattttacc
aaagatgatgagaatgtgaactctcaaccatttatgcgttggagagaccgtttcttattt
tgtgccgaagctatttataaatcacaggctgaaacaggtgaaatcaaaggacattatttg
aatgctactgcgggtacatgcgaagaaatgatgaaaagagctatatttgccagagaattg
ggagttcctatcgtaatgcatgactacttaacagggggattcaccgcaaatactagtttg
gctcattattgccgagataatggcctacttcttcacatccaccgtgcaatgcacgctgtt
attgatagacagaagaatcatggtatgcacttccgtgtactagctaaagctttacgtcta
tcgggtggagatcatgttcacgcgggtacagtagtaggtaaacttgaaggagacagggag
tcaactttgggctttgttgatttactgcgcgatgattatgttgaaaaagaccgaagtcgt
ggtatctttttcactcaagattgggtctcactaccaggtgttctacctgtggcttcaggg
ggtattcacgtttggcatatgcctgctttgaccgagatctttggagatgattccgtacta
caatttggtggcggaactttaggccacccttggggaaatgcaccgggtgccgtagctaac
cgagtagctctagaagcatgtgtacaagctcgtaatgagggacgtgatcttgcagtcgag
ggtaatgaaattatccgtgaggcttgcaaatggagtcctgaactagctgctgcttgtgaa
gtatggaaggagatcacatttaacttcccaaccatcgataaattagatggccaagactag
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