Bradyrhizobium amphicarpaeae: CIT40_17635
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Entry
CIT40_17635 CDS
T05700
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT40_17635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brq03400
]
CIT40_17635
Enzymes [BR:
brq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CIT40_17635
DNA repair and recombination proteins [BR:
brq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIT40_17635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWM01676
UniProt:
A0A2U8PV38
LinkDB
All DBs
Position
4171793..4172467
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AA seq
224 aa
AA seq
DB search
MSTSRSEAARLSRQSPNVVPDRDCPLCPRLVAFREANRAREPLWHNAPVAPFGDIKARLL
IVGLAPGMQGANRTGRPFTGDYAGDLLYATLLEYGFAKGTYHARPDDGLKLVDCRIANAV
HCVPPQNKPLPVEINTCRQFLVANLETMPKLRAIIALGRIAHDSVLKPLKLKASQAPFGH
GAVHQAGAFKLYDSYHCSRYNTNTGVLTPDMFRSVFAKVKADLD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttcgaggagtgaggcggcacggctcagccgccagtctcccaacgtcgttccc
gaccgtgattgtccgctctgcccgcgcctggtcgcctttcgcgaagcgaaccgggcgcgc
gagccgttatggcacaatgcgccggttgcgcccttcggcgacatcaaggcccgcctgttg
atcgtcggccttgcgccggggatgcagggcgccaatcgcacggggcggccgttcaccggc
gattatgccggtgacctgctctacgccacgctgcttgaatatggctttgccaagggcacc
tatcatgcccgtcccgatgacggactgaagctggtcgactgccgtatcgccaacgcagtg
cattgcgttccgccgcagaacaagccgctgccggtcgagatcaacacctgccggcaattt
ctggtggcgaatctcgagacgatgccgaagctgcgcgcgatcatcgcactcgggcggatt
gcgcacgacagcgtgctcaagccgctgaagctgaaagcctcccaggcccccttcggccac
ggcgccgtgcatcaggccggcgcgttcaagctctacgacagctaccactgctcgcgctac
aacacgaacacgggtgtgctgacgccggacatgttcaggagcgtgttcgccaaggtgaag
gcggatctcgattag
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