Bradyrhizobium amphicarpaeae: CIT40_24835
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Entry
CIT40_24835 CDS
T05700
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq00470
D-Amino acid metabolism
brq00550
Peptidoglycan biosynthesis
brq01100
Metabolic pathways
brq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CIT40_24835
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CIT40_24835
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CIT40_24835
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
brq01011
]
CIT40_24835
Enzymes [BR:
brq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CIT40_24835
Peptidoglycan biosynthesis and degradation proteins [BR:
brq01011
]
Precursor biosynthesis
Amino acid ligase
CIT40_24835
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
CBD_PlyG
Motif
Other DBs
NCBI-ProteinID:
AWM02939
UniProt:
A0A2U8PZ58
LinkDB
All DBs
Position
complement(5684053..5685039)
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AA seq
328 aa
AA seq
DB search
MRITILFGGTNRERLVSVASAQALHQALPEADLWWWDVEDKVHVVQSKQLLEHARPFEDE
FKPGTSGIPLAQALDQARAEDRVLVLGLHGGRAENGELQVMCEARGVPFTGSGSASSHLA
FDKIAAKHFAALGGVTPPANIALDTIDEAFAEYGRLIAKPARDGSSYGLIFVNAKQDLVA
VRNAARHEEYVIEPYIAGVEATCGVLERTDGSIISLPPIEIIPGEGNFDYAAKYLLKSTQ
EICPGRFSPEITAALKAQAMLAHRAMSCTGYSRSDFIVSDRGLVYLETNTLPGLTKSSLY
PKALKAEGIAFVDFLRGLIELAGRCVRK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccatcctctttggcggcaccaatcgcgagcgtctggtttcggtcgcctcg
gcccaggccctgcatcaggcgttgcccgaggccgatctgtggtggtgggacgtcgaggac
aaggtgcatgtggtgcagtcgaagcaactgctcgaacatgcccgccccttcgaggacgag
ttcaagcccggcacatcgggcatcccgctggcgcaggcgctcgatcaggccagggccgag
gatcgggtgctggtgctcggcctgcatggcgggcgtgccgagaacggcgaattgcaggtc
atgtgcgaggcgcgcggcgtacccttcaccgggtcgggttcggcctcctcgcatctggcc
ttcgacaagatcgcggccaagcatttcgccgcgctcggcggcgtgacgccgccggcaaac
attgcgctcgacaccatcgacgaggccttcgccgaatacggcaggctgatcgcaaagccg
gccagggacggatcgagctacggcctgatcttcgtcaacgccaagcaggatctcgtcgcg
gtccgcaacgcggccaggcacgaagagtatgtgatcgagccctacattgcaggcgtcgaa
gcgacctgcggcgtgctggagcgtaccgatggttcgatcatctcgctgccgccgatcgag
atcattccgggggagggcaatttcgactacgccgcaaaatatctcctgaaatcgacccag
gagatctgccccgggcgtttttcacccgagatcaccgccgcgctgaaggcgcaggcgatg
ctggcgcaccgtgcgatgtcctgcaccggctattcccggtcggacttcatcgtctcggac
aggggcctcgtctatctcgagaccaacacgctgcccgggctgaccaagtcctcgctctac
cccaaggcgctgaaagccgagggcatcgcgttcgtcgacttcctgcgaggcctgatcgag
ctcgccgggcgttgcgtgcgaaaatag
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