Bipolaris sorokiniana: COCSADRAFT_160442
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Entry
COCSADRAFT_160442 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_160442
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
COCSADRAFT_160442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
SUB1_ProdP9
AAA_27
AAA
AAA_21
AAA_25
Motif
Other DBs
NCBI-GeneID:
19132041
NCBI-ProteinID:
XP_007700069
JGI:
Cocsa1_160442
UniProt:
M2SPH7
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MPGLVRRRRKRPSLAVSEQVDEQSDEGSSTSSSKRARHDRDASDSPSPSTYTQNNDADGT
SAYVQDDFQPGSLVRVKLKNFVTYTAAEFHLGPSLNMVIGPNGTGKSTLVCAICLGLGWG
SEHLGRAKDLGAFVKHGASEAIVEIELATGPGNGSNRIIQRTIRKEDNKSVFFLDGKRVS
QVAVTTMAKQFSIQIDNLCQFLPQDRVVEFAKMTDVDRLRETQRAAAPPHMVEWHDELKA
LRIEERNVQKKETNERNHLEKLEKQQNATREDVDRFHQREGLLRKSKCLKKVRPMIEIKL
LKNDILKMKEERRLAMLELDQIKEDMEPARIALSEVETYRNQIEQVVKLRKNRVDLIKTQ
ADKLVKDIDTEKAKASDSTELIKVELRAKKSREQDIVRITADINRLEQKQQSTAVQYDAA
SFESRKAEVRGQISTISNSVTDKQNSMSGLRERARAIADENARLNTQREQLNTQSGKQAS
LLQRLSPDTAKAWKWIQENKHTLNFKGEVIGPPILECSIPDTRYAQALEGQLRKGDVIAI
TCTHSDDQQLLSNLLIRKVTNGGQGLHDVHLRTSPKPLDSYKPPAMKEDLENFGFQGYML
DFIQGPAAVLAMLCDNNRLHQIAYSPAPISDEQHAAVSNSPIRTWVSGTETFRIVTRREY
NASSTSVTKLRPAQWFTDQPTNTEEVRAIESRITELVQEKEEIQENYAIVTNEMKNLKQQ
LEELKEAREAIQTEQDATKKALAEWRAIPDKIASKQAQLDDHKQQNAETNERIREIKAQA
REISLRVAALALDYAKAVTHMRTFHESLIEAEIRFIEAKSELNALRNENSAIIQRQQTKE
TEVQELGNRIRHLRDEYTKKTAATQQDIETLTEEEKQIVLEYRELPSFDDLEQEVQAVAA
RLEMMAEGNPGAIRAYEKREEDMNRTREKLEQYTVSLGEIREKITEIREQWEPQLDVLIS
KISNAFAYNFQQIGCAGEVAVFKDEEDFDNWSVQISVRFRENEPLSVLNSHRQSGGERAV
STIFYLMALQDLAQSPFRVVDEINQGMDPRNERMVHERMVDIACQERTSQYFLITPKLLN
GLKFHPKMKVHVINSGEHIPDSKTVKGGWDLNDMAKIALRIRKGITVT
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtctagtccgaagaaggcggaaacgtccatcgctggccgtcagcgagcaagtc
gacgagcagtctgacgaaggctcttctacgtcgagcagcaaacgcgcccgccatgaccgg
gacgcgtccgacagtccttccccaagcacgtacacgcaaaacaacgatgcagacggaacg
agcgcatacgttcaagatgacttccagccaggctctctagtcagggtaaagctgaagaac
tttgtcacatacacagctgccgaatttcatctgggccctagtttgaatatggttattggt
ccaaacgggacaggaaagagtacgcttgtgtgcgctatatgcctgggtcttggatggggt
agcgaacatctgggaagagccaaagacttgggtgctttcgtcaaacatggtgctagcgaa
gccattgtcgaaatcgagcttgcaacaggcccaggcaatggttcgaatcgcattatccaa
cgtaccattcgcaaagaagacaacaagtctgttttttttctcgatggcaagcgcgtttcc
caagtcgctgtaacaaccatggccaaacaattctccatacaaattgataacctttgtcaa
ttcttgcctcaagaccgtgtcgtcgagtttgccaaaatgaccgatgtcgaccgcctacga
gagactcagcgtgcagcggcgcccccgcacatggttgagtggcatgacgaactcaaggcc
ctgcgtattgaagaacgaaatgtccagaaaaaggaaaccaacgagcgcaatcatttggaa
aagttggaaaaacagcaaaatgcaaccagagaagatgtcgaccgatttcatcaacgtgag
ggcttgttgcgcaaatcaaaatgtctgaagaaggtcaggcccatgattgagatcaagctg
ctcaaaaacgacatattgaaaatgaaggaagaacggaggctagccatgttagagctggat
cagatcaaggaagacatggaaccagcgcgtatagccttgtcagaagtggaaacatatcgt
aatcagattgagcaagttgtgaagctccgcaagaaccgtgtcgacttgattaagacacaa
gccgacaagctcgtgaaagatatcgatacagaaaaggccaaggccagcgactccacagag
ttgatcaaggtcgagctgagagccaaaaaatcgcgtgagcaggatatcgtccgcattacg
gctgatatcaacaggctagaacagaaacaacagagtacggctgtgcaatacgatgctgcg
tcttttgagagtcgcaaggcagaagttcgaggtcaaatttcaaccatcagcaacagcgta
acggataagcaaaattcgatgtcgggtctacgggaacgcgcgcgtgcaattgcagacgag
aacgcaaggctgaacacacagcgagagcagttaaacacacaaagcggcaaacaggcaagc
cttctacagagactctctcccgacactgcgaaagcttggaaatggattcaggaaaacaag
cacactctgaatttcaagggtgaagtcattggtccgccaatcctggaatgctccattcca
gataccagatatgctcaagctctagaaggccagctgaggaaaggcgacgtcattgcaatc
acttgtactcatagcgatgaccagcagttactgtcgaatctcctcattagaaaggtaacc
aatgggggccaaggactgcacgacgtccatcttcggacgtcccccaagcccctcgattca
tacaaaccacccgccatgaaagaggacttggaaaattttggctttcaaggctacatgctc
gacttcattcaaggacccgccgctgttttggccatgctttgcgacaacaaccgcctgcat
cagatagcttattccccggccccaatatcagatgagcagcacgctgctgtatcaaacagc
cctatccgcacctgggtcagtggtacggagacctttcgcattgtcacgcgtagagagtac
aacgcttcctcaacatccgtcacgaaacttaggcctgcccaatggtttacggaccaacca
actaacacagaagaggttcgggctattgaatcaagaataacagaactggtgcaagagaaa
gaagagatccaggaaaattacgccattgtgacgaacgaaatgaagaacctcaaacaacaa
ctcgaggagctcaaggaggcgagggaagcgatacaaacagagcaagacgctacgaaaaag
gctctagccgagtggcgggctatccctgataagatcgcctccaaacaggcccaattagac
gaccacaagcagcaaaatgcagaaacgaatgagcgcatccgtgaaatcaaagcacaagct
cgtgagatatcattacgcgtagcggcactcgctctagactatgctaaagctgtgacgcat
atgcgcacatttcatgaatcgctcattgaagccgaaatacggttcatagaagccaagtca
gaactcaatgcactgagaaatgaaaacagtgcaataatccaaaggcagcagacgaaagaa
accgaggtccaagaacttggcaatcgtatcagacatcttcgcgacgagtacacaaagaag
acagcagctactcaacaagacattgaaactttgaccgaagaggagaagcagattgttttg
gagtatcgcgagctcccctcatttgacgatctcgagcaggaagttcaagccgttgccgca
cggctggagatgatggctgaaggcaatcctggtgccatcagagcttacgagaagcgcgaa
gaggacatgaacagaacgcgagagaagctagagcagtatacagttagcctcggtgagatc
agggaaaagattacagagattcgcgaacaatgggagccacagcttgatgtcctcatcagc
aagataagtaatgcctttgcatacaacttccagcagattgggtgtgctggcgaagtcgct
gtgttcaaggatgaggaggactttgataactggtctgttcagatctcagtccgcttccgt
gaaaacgagcccctcagtgttctcaattctcaccgccaatccggtggcgagcgcgccgtc
tcgaccattttctaccttatggctctccaggatctcgcccaatcgcctttccgcgttgtc
gacgagatcaatcaaggtatggatccacgcaatgaacgaatggtgcatgagcgcatggta
gacattgcctgccaagagcgtacaagccaatatttccttatcaccccaaagctcttgaat
ggcctcaaattccatcccaagatgaaggttcatgtcatcaattctggagaacatattcct
gactcgaagactgtcaaagggggttgggatctgaatgatatggccaaaattgcgctgagg
ataaggaagggtattacggttacttga
DBGET
integrated database retrieval system
