Bipolaris sorokiniana: COCSADRAFT_181272
Help
Entry
COCSADRAFT_181272 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03082
ATP-dependent chromatin remodeling
bsc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCSADRAFT_181272
03083 Polycomb repressive complex
COCSADRAFT_181272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_181272
Enzymes [BR:
bsc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
COCSADRAFT_181272
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
COCSADRAFT_181272
HDAC complexes
Sin3A-HDAC complex
COCSADRAFT_181272
BRAF-HDAC complex
COCSADRAFT_181272
REST complex
COCSADRAFT_181272
SHIP complex
COCSADRAFT_181272
MiDAC complex
COCSADRAFT_181272
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
COCSADRAFT_181272
Heterochromatin formation proteins
Other heterochromatin formation proteins
COCSADRAFT_181272
Chromatin remodeling factors
NuRD complex
COCSADRAFT_181272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
19133299
NCBI-ProteinID:
XP_007699987
JGI:
Cocsa1_181272
UniProt:
M2SP92
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MVDGNDMAGPTGAVHINTGTASQPKKVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMN
YGLYTKMEIYRAKPASKYEMTQFHTDEYIEFLHKVTPDNMEQFTREQSKYNVGDDCPVFD
GLFEFCGISAGGTMEGAARLNRGKCDVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELL
RYKQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGSGKNYSV
NFPLRDGITDETYRNIFEPVIEAVMTYYGPEAIVLQCGGDSLSGDRLGCFNLSMDGHANC
VRYVKSFGVPVIVLGGGGYTMRNVARTWAYETGELVSQKMSKQLPFNDYYEYFAPDYELD
VRPSNMENANSHDYLHKIKSAVIENIRRTGRPSVEAFTTIPDVPTALGRAMDSDAEDEED
DIDADENRDVRMTQRQRDKQIEHDGELYDASDDEDYKNSLGVRAQPGVKKRRNITDFPNP
NAAPADALDLMEDINGGSAVSTRQPSAGAKSRTQTPAAAEQEVDKDGDVDMDAPVPEAAP
EAVPEAAPEAAPETAPATAPPAVTETSDTAAPVAAPEREPSPAGVVTPPESPPTAVPATT
APTSAPVADVEMAETNDKEETVAAKEEGEAERDTENVKGEVRAEVAKD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggtggacggaaacgacatggcaggcccaactggcgctgtccacattaataccggcact
gcgtcgcagccaaagaaggtcgcatatttttacgattccgatgtcggtaactacgcctat
gttgcgggacaccccatgaagccgcatcgtatacgaatggcgcatagtctcattatgaat
tacggtctctacacaaagatggagatctaccgcgcaaaacccgcttctaagtacgagatg
acgcagttccacacggacgagtacattgaattcctgcataaggtcacgccagacaacatg
gagcaattcacccgcgagcaaagtaaatacaatgtgggagacgattgccctgtgtttgat
ggtctttttgagttttgcggtatcagcgctggcggtaccatggagggcgccgctcgtctg
aaccgggggaaatgcgatgtcgctgtaaactgggctggtggtttgcatcacgcgaaaaag
agcgaggccagtggattctgctatgtcaatgacattgtcctcggaattatcgagttgctt
aggtataagcagcgtgtactctacatcgacatcgacgtccatcacggagacggtgttgaa
gaggccttttacactaccgatcgtgtcatgaccgtctcattccacaaatacggagagtac
ttccccggtactggagaactccgcgacatcggtgttggtagtggcaagaattactctgtc
aacttccctcttcgagacggtatcaccgacgagacatacagaaatatctttgagcctgtc
atcgaggcagtaatgacttattatggacccgaagccatcgttctgcaatgcggtggtgac
agtctttcaggagacaggctcggttgcttcaatttgagcatggacggacacgccaactgt
gtcaggtacgtcaagagctttggtgtaccagtcatcgtcctaggaggcggtggttacacc
atgaggaatgtcgcgcgaacttgggcatacgagactggagagcttgtttcgcaaaaaatg
tccaagcaactacctttcaacgactactacgagtactttgcgcccgactacgaactggat
gtccggccatcaaacatggaaaacgccaactctcacgactatttgcataagatcaaatca
gctgtcattgagaacattcgcagaacgggacgaccatcggtcgaggctttcacaacgatc
ccagatgtgcccacggctctaggtcgcgcgatggattctgatgctgaggacgaagaagac
gatattgatgcggacgaaaaccgagatgtgcgcatgacacagcgccagcgcgataagcag
atcgagcatgacggtgaactttacgatgcaagcgatgatgaggattacaagaatagcctc
ggagtgcgcgctcagcccggcgtcaagaagagacgaaacattactgacttccccaatcct
aatgcagccccagctgacgccctggatcttatggaagacatcaatggcggaagcgctgtt
tcgacccgacaaccctctgcaggcgcaaaatcgcgtacacaaacacctgctgctgctgag
caggaggttgacaaagatggtgatgtcgacatggacgcacccgtccctgaagctgcccct
gaagctgttcccgaggccgcccccgaggctgcccctgagaccgcccccgctactgctcct
ccagccgttactgaaacctccgatactgccgctcctgttgctgcacctgagcgggaacca
tctcctgcaggcgttgtaaccccacctgagtcgccacccactgctgtgcctgctacaacg
gcacccacatcagccccagtcgctgatgtggaaatggccgaaactaatgataaggaagag
actgtcgcggcaaaagaggagggtgaagcggaacgcgacactgaaaacgtcaagggtgag
gtcagggcggaggtcgccaaggactag
DBGET
integrated database retrieval system