Bipolaris sorokiniana: COCSADRAFT_38782
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Entry
COCSADRAFT_38782 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03022
Basal transcription factors
bsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSADRAFT_38782
09124 Replication and repair
03420 Nucleotide excision repair
COCSADRAFT_38782
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bsc01001
]
COCSADRAFT_38782
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_38782
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_38782
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_38782
Enzymes [BR:
bsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
COCSADRAFT_38782
2.7.11.23 [RNA-polymerase]-subunit kinase
COCSADRAFT_38782
Protein kinases [BR:
bsc01001
]
Serine/threonine kinases: CMGC group
CDK family
COCSADRAFT_38782
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
COCSADRAFT_38782
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
COCSADRAFT_38782
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
COCSADRAFT_38782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Motif
Other DBs
NCBI-GeneID:
19139339
NCBI-ProteinID:
XP_007702112
JGI:
Cocsa1_38782
UniProt:
M2R454
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MASPVVLSPRPNPPGAAMPTASKTRTLALPSHTTKSVKSPAPPAPATIAGDGGMDLAEQM
NDRVRSQFVMGPRLGEGTYAVVYQAHYRDNPKHIVAIKKIKYNAEYPNGIAPDAIREMQF
LFEMSHPNVIKLHDVFSTKEQNLSLVLEHLPLGDLEKLWKNKEITYTKADIKSWMNMLCQ
GIWFCHENFVLHRDIKGSNALIAADGTIKIADFGLARSFADPGVKMTTMVITRMYRPLEL
LYGCSHYSGTADMWSIGVLMAELCKRDWFLYSDTDMRQVAVICEKFGTPTEETWPGVTAL
PYYVAPDKQTGPQGTTAFRQTRPRSWWKQEFPTLGDDGCDFIRGLLTLDPQKRYTARKAL
EDKWWTNAPRPTKKENLPKEGGGTKAMGEDLKRRGGETPANGRADKVARKLDFGSMG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcccgtcgtcctcagcccacggcctaatccgcccggcgcggccatgcctacc
gcgagcaagacgaggacactcgccctcccaagccacaccaccaagtccgtcaagtcgcca
gcgccacccgcgcccgccacgatagccggcgatggcggcatggacctcgcagagcagatg
aacgaccgggtacggagccagttcgtcatgggcccacgattaggagagggtacctacgcc
gtcgtataccaagcgcactaccgcgacaaccccaagcacattgtcgccatcaagaagatc
aaatacaacgccgagtaccctaacggtatcgcccccgatgccatccgcgaaatgcaattc
ctcttcgaaatgtcgcaccccaacgtcatcaaactccacgacgtcttctccaccaaagaa
caaaacctctccctagtcctcgagcaccttcccctcggcgacctggagaagctctggaaa
aacaaagaaattacatacacaaaagcagatatcaagtcctggatgaacatgctctgccag
ggcatatggttctgccacgaaaacttcgtcctccaccgcgatatcaaaggcagtaacgcc
ctcatcgccgcagacggcaccatcaaaatcgccgatttcggtctcgcacgcagcttcgct
gatccaggcgtcaaaatgactaccatggtcataacgcgcatgtaccggcccctcgagctt
ctctacggctgctcgcactacagcggaacagcagacatgtggagcataggcgttctcatg
gccgaactctgtaagcgcgactggttcctatattccgacacggacatgcgccaggtcgcc
gtcatctgcgagaaattcgggaccccgacggaggagacgtggcccggtgtcacggcttta
ccttattacgtcgcccccgataaacagacggggccgcagggtaccacggcgttcagacag
acccgcccgcgtagctggtggaagcaagagttccccaccctcggagatgatgggtgcgat
tttattaggggcctgttgacgctggatccgcagaagaggtatacggccaggaaggcactc
gaggataagtggtggactaatgcgccgcgcccgactaagaaggagaatttaccaaaggaa
ggtgggggtacgaaggctatgggcgaggatttgaagcggagagggggagagacgcctgcg
aatggtcgcgctgataaggtggccaggaagctggattttgggtccatgggttga
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