Bradyrhizobium sediminis: KMZ68_20930
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Entry
KMZ68_20930 CDS
T08500
Name
(GenBank) ATP-grasp domain-containing protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bsei
Bradyrhizobium sediminis
Pathway
bsei00470
D-Amino acid metabolism
bsei00550
Peptidoglycan biosynthesis
bsei01100
Metabolic pathways
bsei01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bsei00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KMZ68_20930
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KMZ68_20930
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KMZ68_20930
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bsei01011
]
KMZ68_20930
Enzymes [BR:
bsei01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
KMZ68_20930
Peptidoglycan biosynthesis and degradation proteins [BR:
bsei01011
]
Precursor biosynthesis
Amino acid ligase
KMZ68_20930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
QWG17406
UniProt:
A0A975NMU4
LinkDB
All DBs
Position
complement(4390081..4391067)
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AA seq
328 aa
AA seq
DB search
MRATILFGGTNKERLVSVASAQALHQALPEADLWFWDVDDTVHDVRSEALLGHARPFEDD
FKPGNRGVGLEQALDKAKAEGRVLVLGLHGGRAENGELQAMCEMRGIPFTGSGSASSHLA
FDKVAAKRFAAIAGVKAPAGIALADIDAAFAEYGKLIAKPARDGSSYGLIFVNAKQDLAA
VRNAARTEDYLIEPFVSGVEATCGVLEQSDGSVFSLPPIEIVPAEGGFDYTAKYLLKSTQ
EICPGRFTPEITRQIMDEALKAHKALSCSGYSRSDFIISERGPVFLETNTLPGLTKASLY
PKALKAQGIGFADFLHDQIVLATRHTQK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctaccatccttttcggcggcaccaacaaggagcgcctggtttcggtcgcttcc
gcccaggcgctgcatcaggccttgcctgaagccgacctgtggttctgggatgtcgacgac
accgtgcatgacgtccgctccgaggcgctgcttggccatgcgcggccgttcgaggatgat
ttcaagcccggaaaccgtggcgtcgggctcgaacaggcgctcgacaaggcgaaggcggag
ggccgcgtgctggtgctcggcctgcacggcggcagggcggagaacggcgagcttcaggcg
atgtgcgagatgcgcggcatcccgttcaccggctccggctcggcgtcgtcgcatctggcc
ttcgacaaggtggcggccaagcgcttcgccgcgatcgcgggggtgaaggcgccggccggc
attgccctggcagatatcgacgcggcgtttgccgaatacggcaagctgattgccaagccg
gcgcgcgacggctcgagctatgggctgatcttcgtcaacgcgaagcaggatctcgccgcc
gtccgcaacgccgccaggaccgaagattatctgatcgagccgttcgtctcgggcgtggag
gcgacctgcggcgtgctggaacagtccgacggttcggtgttctcactgccgccgatcgag
atcgttccggccgagggcggcttcgactacactgccaaatacctgctcaaatcgacccag
gagatctgccccgggcgcttcacgcccgaaatcaccaggcaaatcatggacgaggcgctg
aaagcccataaagcactttcatgcagcggctactcccggtcggacttcatcatctcggag
aggggaccggtcttcctcgaaaccaacaccctgccggggctgaccaaggcttcgctctat
ccgaaggcgctcaaggcccagggcatcgggtttgccgatttcttgcacgatcagatcgtt
ctggcgacacggcacacgcaaaagtag
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