Bacillus subtilis BSn5: BSn5_03125
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Entry
BSn5_03125 CDS
T01417
Name
(GenBank) ATP-dependent RNA helicase; cold shock
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bsn
Bacillus subtilis BSn5
Brite
KEGG Orthology (KO) [BR:
bsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsn03019
]
BSn5_03125
03009 Ribosome biogenesis [BR:
bsn03009
]
BSn5_03125
Enzymes [BR:
bsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSn5_03125
Messenger RNA biogenesis [BR:
bsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSn5_03125
Ribosome biogenesis [BR:
bsn03009
]
Prokaryotic type
rRNA helicases
BSn5_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
ADV93257
LinkDB
All DBs
Position
complement(572282..573598)
Genome browser
AA seq
438 aa
AA seq
DB search
MKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLL
PLLNKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSID
KLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPED
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIM
SHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYII
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQAMTIYELTDEDALVRL
EKMGIEFDYLELEKGEWKKGDDRQRRKKRKKTPNEADEIAHRLVKKPKKVKPGYKRKMSY
EMEKIKKKQRRNQSKKRK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacgaaatttgaactttatgaattgaaaccatttattatagatgcagtacat
cgccttggtttttacgaaccgactgatatccagaaaaggctgattcctgcagtgttaaaa
aaagaaagcgtcatcggccagtctcagacgggtactggaaagactcacgcttatttactg
cctttattaaacaaaatcgatcctgctaaggatgtcgttcaggtagtcattacggctccg
acaagagagctagccaaccagatttatcaggaagcgcttaaaatcacgcagggtgaggaa
ggcagtcagattcgctcgaaatgttttatcggaggcactgataaacaaaaatcaattgat
aaattgaaaatacagccgcatcttgttgtcggtacacccggacggattgctgacttaatc
aaagaacaggcgttaagtgttcataaagcggaatctcttgttattgatgaagcggattta
atgctggacatgggattccttgcagatgtagattacatcggttcccgcatgcctgaggat
ctgcaaatgcttgtgttctcagcgaccataccggaaaagctgaaaccatttttgaagaaa
tacatggaaaatccgaaatacgcccatgtggagccaaaacaggtgactgctgcgaaaatc
gagcatatcctcattccttcgaaacatcgtgacaaggacaagctcctttttgacatcatg
tcgcatctgaatccatacctggggattgtgtttgccaacacgaaaaatacggctgaccat
attgcccagtatctgactggcaaaggcatgaaaatcggcttgctgcacggcggattaaca
ccacgtgagcggaaaaaagtcatgaagcagatcaatgatttggaattcacatatatcatt
gcaactgaccttgccgcaagaggtattgatattaaaggtgtcagccatgttatcaactat
gagctgccggatgatctcgatttctatgttcaccgtgtgggcagaacggctcgtgccggc
tcatcaggacaagcgatgaccatttatgagcttactgatgaggatgcattagtaagactc
gaaaaaatgggcatcgaatttgattacttagagcttgaaaagggcgaatggaaaaaaggc
gatgaccgtcagcgccgcaaaaagcgtaaaaaaacgccgaatgaagcggatgaaattgct
catcgtctcgtgaaaaagccgaagaaggttaagcctgggtataaaaggaaaatgagctat
gagatggagaaaatcaagaaaaaacagagaagaaaccaatctaagaaaagaaagtag
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