Bacillus subtilis BSn5: BSn5_05370
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Entry
BSn5_05370 CDS
T01417
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bsn
Bacillus subtilis BSn5
Pathway
bsn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSn5_05370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsn03400
]
BSn5_05370
Enzymes [BR:
bsn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BSn5_05370
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSn5_05370
DNA repair and recombination proteins [BR:
bsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSn5_05370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Mrpl_C
Motif
Other DBs
NCBI-ProteinID:
ADV93702
LinkDB
All DBs
Position
complement(980838..981668)
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AA seq
276 aa
AA seq
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MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK
FLLFHLDHYVMVSHLRMEGKYGLHQAEEPDDKHVHVIFTMTDGTQLRYRDVRKFGTMHLF
KPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVVGLGNIYVDEA
LFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYINSQGEIGMFQLQHF
VYGKKDEPCKNCGTMISKIVVGGRGTHFCAKCQKKK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattaccagaggttgagacggtccggcgcactctgaccgggcttgtaaaggga
aaaacaatcaaatcggtagagatcagatggccgaatatcatcaaacggcctgccgaaccg
gaggaatttgcgcgaaaactagcaggagaaacgatacagtccatcggaagacggggaaag
tttttactgtttcatttagatcattatgttatggtttctcaccttcgaatggaaggaaaa
tacggtcttcatcaagccgaggagcctgacgataaacacgtgcatgtcatattcacgatg
acggatggaacccagctccggtacagggatgtgcggaaatttggaaccatgcacttattt
aaaccgggagaagaagcgggcgagctcccgctttctcagttagggccggagccggatgca
gaagaatttacaagtgcgtatttaaaagaacggcttgcgaaaacaaaccgcgctgtcaaa
actgccctactggatcaaaaaacggtagttggactcgggaacatttatgtggatgaggct
cttttcagagcgggtgtccatcccgagacaaaagcaaatcaattatcagataaaacaatc
aaaacccttcacgctgaaatcaaaaacactctgcaggaggcgattgatgcgggcggaagc
acagtccgttcatatatcaactcccaaggggaaatcggaatgttccagctgcagcatttt
gtgtacggaaaaaaagacgagccatgcaaaaattgcggaacgatgatttcgaaaattgtc
gttggaggaagaggcacgcatttttgcgcaaagtgccagaaaaaaaagtag
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