Bacillus subtilis BSn5: BSn5_20170
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Entry
BSn5_20170 CDS
T01417
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsn
Bacillus subtilis BSn5
Brite
KEGG Orthology (KO) [BR:
bsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsn03032
]
BSn5_20170
03400 DNA repair and recombination proteins [BR:
bsn03400
]
BSn5_20170
Enzymes [BR:
bsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSn5_20170
DNA replication proteins [BR:
bsn03032
]
Prokaryotic type
DNA Topoisomerases
BSn5_20170
DNA repair and recombination proteins [BR:
bsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSn5_20170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Toprim_3
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
ADV96638
LinkDB
All DBs
Position
3894150..3896225
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLNSDCRVVFNEITKDAIKE
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFKPEEYWTIDGTFLKGQETFEASFFGKNGKKLPLNSEADVKEILSQLKGNQYTVEK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGREGTVGLITYMR
TDSTRISNTAVDEAAAFIDQTYGKEFLGGKRKPAKKNENAQDAHEAIRPTSVLRKPSELK
AVLGRDQMRLYKLIWERFVASQMAPAVLDTMSVDLTNNGLTFRANGSKVKFSGFMKVYVE
GKDDQMEEKDRMLPDLQEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEERGIGRPSTY
APTLDTIQRRGYVALDNKRFVPTELGQIVLDLIMEFFPEIINVEFTAKMERDLDHVEEGN
TEWVKIIDNFYTDFEKRVKKAESEMKEVEIEPEYAGEDCELCSSPMVYKMGRYGKFLACS
NFPDCRNTKPIVKQIGVKCPSCGEGNIVERKSKKKRVFYGCDRYPDCEFVSWDKPIERKC
PKCGKMLVEKKLKKGIQVQCVECDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatctagtcatcgtggaatcgcccgctaaggcgaaaacgattgaacgttac
ttaggtaaaaaatataaagtaaaagcatcaatgggacatgtccgggatcttccaaaaagt
caaatgggagttgacatagaacagaattttgaaccgaaatatattaccattcgaggtaaa
ggcccggtattaaaagagctgaaaacggctgcgaaaaaagccaaaaaagtgtatctcgca
gccgaccccgacagagaaggggaagcgattgcatggcatttggcacacagtcttgattta
gatctcaactcagactgccgtgtggtgtttaacgaaattacaaaagacgctattaaggaa
tcgtttaagcatccccgcatgatcaatatggatttagtggatgcacagcaagccagacgt
attttagacaggcttgtcggatataaaatcagtccgatcttatggaaaaaagtcaaaaaa
gggcttagcgcaggacgcgtgcaatccgttgccctccgtttgattattgaccgtgaaaaa
gagattaacgactttaagcctgaggaatattggacaattgacggtacgttcttaaaaggt
caagaaacctttgaagcgagctttttcgggaaaaacggcaaaaaacttcctttaaatagt
gaagctgatgtaaaagagattctttctcagctcaaagggaatcaatatacagttgaaaaa
gtaaccaaaaaggaacgcaaacgtaatcccgctttgccttttaccacttctaccctgcag
caggaagcggctcgcaagctcaatttcagagcgaagaaaacgatgatgattgcacagcaa
ttatatgaaggaattgatttaggaagagaaggaacggttggtctgatcacgtatatgaga
acggattcaacccgtatttcaaatacggctgttgatgaagcagctgcatttattgatcag
acttatggaaaagagttcctaggcggcaaacggaagcctgcgaaaaagaatgaaaatgcc
caggatgcccacgaagcaattcggccgacatcagttcttagaaaaccaagtgaattaaaa
gcagtcctcggcagagaccaaatgagactgtataaattaatttgggagcgttttgttgcc
agccaaatggcaccggctgttctcgatacaatgagtgtcgacctgacaaacaacggtttg
acatttcgtgcaaatggaagtaaagtcaagttttccgggtttatgaaggtgtatgttgaa
ggaaaagacgatcaaatggaagaaaaagaccggatgctgcctgacttacaagaaggcgac
acggtattatcaaaagatatagaacctgagcagcattttacccagccgcctccgcgatat
actgaggcccggcttgttaaaacccttgaagaacgcggtatcggccgtccatccacatat
gctccgacacttgatactattcagcggcgcggctacgtggcattggataataaacgtttc
gttccgactgaattaggtcagatcgttcttgacttgatcatggagtttttccctgagatc
attaacgttgagtttacagctaaaatggagagagatcttgatcatgttgaagaaggaaat
accgaatgggtcaagattatcgataatttctacaccgattttgaaaaacgcgtcaaaaaa
gccgaatcggaaatgaaggaagttgagattgaaccagagtatgctggagaggattgtgaa
ttgtgcagttctccaatggtatataaaatgggacggtacggtaaattcttagcttgctcc
aacttccctgactgccggaacacgaaaccgattgtgaaacaaattggtgtgaagtgcccg
agctgcggagaaggaaacattgttgagcgaaaatcgaaaaagaaacgggtgttttacggc
tgtgaccgttatccggactgtgaattcgtatcatgggacaaaccaattgaacgaaaatgc
ccgaaatgcggaaaaatgctcgtcgagaaaaaactcaaaaaaggcatacaagtccaatgc
gtggaatgcgattataaggaagaaccacagaagtag
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