Betta splendens (Siamese fighting fish): 114865507
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Entry
114865507 CDS
T08231
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03250
Viral life cycle - HIV-1
bspl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114865507 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114865507 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114865507 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bspl04147
]
114865507 (pdcd6ip)
Membrane trafficking [BR:
bspl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
114865507 (pdcd6ip)
Exosome [BR:
bspl04147
]
Exosomal proteins
Proteins found in most exosomes
114865507 (pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF2226
AAT
COG3_N
Motif
Other DBs
NCBI-GeneID:
114865507
NCBI-ProteinID:
XP_029022510
EnsemblRapid:
ENSBSLG00000021280
UniProt:
A0A6P7NWZ3
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Position
11:complement(8954961..8964770)
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AA seq
877 aa
AA seq
DB search
MATFISVPLKKSSEVDLVKPLSKFVTTTYPAGEEQGEYIRAVEELNKLRKNALGRPLDKH
ESSLEILLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNAAALASQIAAEQNLDNDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGALSLIMLAQAQEVFFLKATADRMKDAVIAKLANQSADFYGDAFKQCQYKDNLPKYF
YFQEVLPVLAAKHCIMQANAELHQSMLAKQKKRFGEEIARLQHAAELVKTVASRYDEYVS
VKDLTDKINRALTAAKKDNDFIYHDRVPEVKDLESIGKAALVKATAITPPLSQKFSDLFE
KMVPMAVQQSMSMYSQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
ISEKSRSIVQQGGLQSIEQLIRDLPELLTRNREILDESLKMLDDEETTDNELRAKFNQRW
NRTPSGDLYKPLRGEGANFRSVLDKAVQADQVVRDRYNAHCEMIALLCKPENELIAAIPS
ANPVKTLQGSEVVNVLRSQLAQLDQMKKERETLEGEIKAVTFDMSTCFLTALAQDGAINE
EQLSLSQLDQLYGAYNQRVQATLRTQEELLGQVQTSHQEFSSLKQSNTEANQREEVLKKL
ASAHDSYVEISSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFSVPAYQSNPAVPAAPAAGPTPAPRTVFVQQPQQAPQGPAKPEPPARPPPPSFTP
QAASGAPPTGPPTSNPPPVAPPSQPQGPPYPTYQGYPGYFQVPMGYNPYPYAQYNMPYMP
YQGTPGQAGYPGAAPAGQPYPGYPQQPPQQQPYYPQQ
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttcagtcccgttgaaaaagtcctcggaggtggatctggtgaagccg
ctgtcgaaatttgtaacgaccacgtacccggcgggcgaggagcagggcgagtatatccgc
gccgtggaggagttgaacaagctccgcaagaacgcgctgggtaggccgctggacaagcac
gagagctccctggagatcctgctcagatactatgaccaactgtgtgctgttgagccaaag
tttcccttttctgaaaaccagctctgcctaaccttcacatggaaggatgcctttgacaag
ggatcactgttcggtggctcagtcaagctcgctttggccagtttgggctacgagaagacc
tgtgtgttgttcaatgcagcagctctggccagtcagattgctgcagagcagaacctggac
aatgatgaaggactaaaggctgcagccaaatactatcagctggccagtggtgcatttgga
cacatcaaggacacggtgctgtctgcactgaacagggagcccactatggatatctcccct
gagaccgtaggtgccctgagcctcatcatgctggcccaggcccaggaggtcttcttcctt
aaggccactgcagataggatgaaggatgctgtcattgcaaagctggccaatcagtcagca
gatttctatggcgacgccttcaagcagtgccagtacaaagacaaccttcccaagtatttt
tattttcaggaagtgctgccggtgctggcggccaagcactgcatcatgcaggccaacgcc
gagctgcaccagagcatgctggccaagcagaagaagcgcttcggggaggagattgctcga
ctgcagcatgcagcagagctggtaaagactgtggcatcccgttacgatgagtatgtcagc
gtcaaggacttgaccgacaagatcaaccgtgctctcaccgctgccaaaaaagacaatgac
tttatataccatgatcgtgtgcctgaagtcaaggacctggagtcaattggcaaggcagcg
ctggtcaaggccactgcaatcacacctccactcagccagaagttttcagatttgtttgag
aagatggtcccaatggccgtgcagcagtccatgagcatgtacagccagcggaaggccgag
accgtcaatagactggttggaacgatgagggaggccaccaatctctgcaacggggtgttg
gcgtctctcaacctgccagctgctctggaggatctttccggagactccatcccacagtcc
atttcagagaagtccaggtccatcgtgcaacagggaggactgcagagcatcgagcaacta
atcagagacctgcctgagcttctgacccggaacagagagatccttgatgagtctctcaag
atgctcgacgatgaagagacgaccgacaacgagctgagagcaaaattcaaccagcgctgg
aacagaaccccctctggagacctatacaaaccgcttcgtggagagggtgccaacttccgc
agcgtgttggacaaagccgttcaggctgaccaggtggtgagggaccgctacaacgcccac
tgtgaaatgatcgccctgctgtgtaaaccggagaacgagctcattgctgccattccctca
gccaatccggtcaagacgctgcagggcagcgaggtagtgaatgtgctgcgctcccagctc
gcccagctggaccagatgaagaaggagagggagactctggagggagagatcaaggccgtg
acgtttgacatgtccacctgcttcctgacggcgctggcccaggacggcgccatcaacgag
gagcagctgtcgctctcgcagctcgaccagttgtacggcgcgtacaaccagagagtacag
gccacgctccgcacacaggaggagctgctgggacaagttcagacgtcccaccaggagttc
agcagtctgaagcagtccaacacggaggccaaccagagggaggaggtcctgaagaagctg
gcctcggcccacgacagctacgtcgagatcagcagcaacctgcgcgaaggcactaagttc
tacaacgacttgacagaaatcttgctgaagttccagaacaaatgcagcgacatcgttttt
gctcgcaagacggagcgggatgaactacttaaggacctgcagcagagcattgctcgggag
cccagtgctccatccttcagcgtccccgcctatcagagcaaccccgccgtccccgcggcg
cccgctgctggcccgacacctgcccccagaactgtgtttgtgcagcagcctcaacaagcc
ccgcagggtccagccaagcctgagcccccagccaggccccctccccccagcttcacacca
caggcagcctccggtgcaccccccaccggcccccccactagcaacccgccacctgtggct
ccaccgtcccagccccagggaccaccatatcccacctatcaaggctaccccgggtacttc
caggtgcctatgggctacaacccttatccctacgcacagtacaacatgccctacatgcca
taccaggggaccccaggacaggcaggctacccaggagcggctcctgctggacagccctac
cctggctaccctcagcagcccccacagcagcagccctactaccctcagcaataa
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