Bacillus subtilis subsp. spizizenii W23: BSUW23_02660
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Entry
BSUW23_02660 CDS
T01302
Symbol
ydfD
Name
(GenBank) putative PLP-dependent transcriptional regulator
KO
K18907
GntR family transcriptional regulator, regulator for abcA and norABC
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Module
bss_M00700
Multidrug resistance, efflux pump AbcA
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bss03000
]
BSUW23_02660 (ydfD)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bss01504
]
BSUW23_02660 (ydfD)
Transcription factors [BR:
bss03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BSUW23_02660 (ydfD)
Antimicrobial resistance genes [BR:
bss01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
BSUW23_02660 (ydfD)
Multidrug resistance, efflux pump NorB [MD:
M00702
]
BSUW23_02660 (ydfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
Asp_aminotransf
HTH_Crp_2
HTH_11
HTH_24
HTH_41
Motif
Other DBs
NCBI-ProteinID:
ADM36590
UniProt:
E0U4D2
LinkDB
All DBs
Position
548310..549758
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AA seq
482 aa
AA seq
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MSFTEEIKMKKLPKYRQIVHFIKEKIGNGEWPIGSQIPSQRTLAKDFQVNRSTVITALEE
LMADGLIEGRMGKGTVVINNTWTLLAKNSAPNWDQYVTSGIQQPSQKIVQEINQSESNTD
LIQLSKGELSTEIFPLTAMKEMMGKVSQNMEAFGYEEPKGYLPLREALSNYLRTFGINAS
SSSILIVSGALQALQLISMGLLQRGSTVYLDQPSYLYSLHVFQSAGMKLTGLPMDNEGLL
PGNLHMTRGERGRVILYTNPCFHNPTGILMSQKRREEILAASENTQLPIIEDDIYRELWI
DEIPPCPIKTIDKNGHVLYIGSLSKTLSPGLRIGWIVGPEPVIERLSDIKMQTDYGSSSL
SQRVAAEWFTSGQYQQHLEKVRQQLKVRRELALSALETHLKDVATWNMPKGGFFVWIKIL
PSISMKSLYIKALSKGILLNLGSIYAQEKGNYVRLSYAYASLEDLQKGIYELGLIIKELA
SR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagctttacagaagaaatcaagatgaaaaagcttcctaagtacagacaaatcgttcat
tttattaaggagaaaataggaaatggagagtggccgattggaagccagattccaagccag
cgcacgcttgcaaaagactttcaggtaaatcgaagcacagtgattacagccttagaggaa
ttaatggcagatgggttaatagaaggcagaatggggaaaggcacagttgttattaacaat
acatggacactattggctaaaaattctgcccctaattgggatcaatatgtaacctctggc
attcagcagcctagccaaaaaatcgtgcaagagataaaccaatcagaatcaaatacggat
cttatacagctcagtaaaggcgagctttcaactgagatttttcctttaactgctatgaaa
gagatgatgggcaaggtatctcaaaacatggaagcattcggatatgaggaaccaaaagga
tatcttccgttgagagaggcattaagcaactacttaagaacctttggaatcaatgcctca
tcttcttccattctaattgtttcgggagcattgcaagccctgcagctgatatcgatgggg
cttttgcaaagaggatcaactgtttatcttgatcagccatcttatctttattcattacac
gtatttcaatctgctggtatgaaactgactgggcttcctatggataatgagggacttttg
ccgggaaatcttcatatgacaagaggggaacggggaagggttatattatatacaaatcct
tgttttcataatccgaccggtattttaatgtcgcaaaagcggagggaagaaatccttgca
gctagtgagaacacacagcttcccattattgaagatgacatttatcgtgagttatggata
gatgaaattccgccatgtcctattaaaacaatagataaaaatgggcatgtgttatacata
ggcagtttatcgaaaacattaagcccgggcttgaggattggatggatagtcggaccggaa
ccggtgattgaacgtttatctgacattaaaatgcaaacagattacggatccagttcgtta
tcccagagagtagcggcagagtggtttacatccggccaataccagcagcatttagaaaag
gttagacagcaattaaaggtgagaagagaattggccttgagtgcattagaaacccatttg
aaggatgttgcgacatggaacatgccaaagggaggtttctttgtctggataaaaatattg
ccttcaatatcaatgaaatccctttatataaaagctttatcaaaagggattcttctcaat
ctcggcagtatctatgctcaggaaaaagggaattatgttcgcttatcatatgcttatgca
tcgcttgaagaccttcaaaaggggatttatgaattgggcttgattatcaaagaattggca
agcaggtaa
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