Bacillus subtilis subsp. spizizenii W23: BSUW23_08540
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Entry
BSUW23_08540 CDS
T01302
Symbol
polC
Name
(GenBank) DNA polymerase III (alpha subunit)
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Pathway
bss03030
DNA replication
bss03430
Mismatch repair
bss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSUW23_08540 (polC)
03430 Mismatch repair
BSUW23_08540 (polC)
03440 Homologous recombination
BSUW23_08540 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bss03032
]
BSUW23_08540 (polC)
03400 DNA repair and recombination proteins [BR:
bss03400
]
BSUW23_08540 (polC)
Enzymes [BR:
bss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSUW23_08540 (polC)
DNA replication proteins [BR:
bss03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSUW23_08540 (polC)
DNA repair and recombination proteins [BR:
bss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSUW23_08540 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Zn-ribbon_8
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
ADM37754
UniProt:
E0TUE7
LinkDB
All DBs
Position
1683631..1687944
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQINMTDDTFMTYFEDGEIKKLTIHKASKSWHFHFQFKSLLPFQI
YDTLTTRLTQSFAHIAKVTSSIEVQDAEVSESIVQDYWSRCIEELQGISPPIISLLNQQK
PKLKGNKLIVKTKTDTEAAALKNKYSSMIQAGYRQFGFPDLQLDAEIFVSEQEVQKFREQ
KLAEDQERAMQALIEMEKKDKESDEDQVPSGPLVIGYQIKDSEEIRTLDSIMDEERRITV
QGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDDGVPIAYNAAHRLLEEET
YVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFEAFANPHRPLSATIIELTGITDDML
RDAPDVVDVIRDFREWIGDDILVAHNASFDMGFLNVAYKKLLEVEKAKNPVIDTLELGRF
LYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLKDAAEKGIQYHDELNENM
GQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQLEKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDVASFYDYLEVQPPEVYRHLLELELVRDEKSLKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGEEKAKEIVVTNTQKVASLIDDIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGE
QLPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLPPHYVCSECQHSEFFNDGSVGSGFDLPDKICPHCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDHNLH
MRGAEVDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVPDWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIKAVMED
INSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSATEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatg
acagatgataccttcatgacatactttgaagatggcgagattaaaaagctgacaatacac
aaagcttctaagtcttggcattttcattttcaatttaaatctttgctgccttttcaaata
tatgacacattaacaacgaggctgacgcaatcgtttgcccacatagcaaaagtgacatct
tcaattgaagtgcaggatgccgaggtcagtgaaagtatcgttcaagactactggtcacga
tgcattgaagaattgcaaggcatttcgccgccgattatcagtctcttaaaccagcaaaaa
ccgaagctaaagggaaataaactgattgtcaaaacaaaaacggacacagaagcggctgct
cttaagaacaaatacagttccatgattcaagccggctaccgtcaatttggtttcccagac
cttcagcttgatgctgaaatatttgtatccgagcaagaagttcaaaagtttcgggagcaa
aaacttgcagaagaccaagagagggccatgcaggcgctgattgaaatggagaagaaagat
aaagaaagtgatgaagatcaagtgccatctgggcctcttgtcatcggttaccaaattaaa
gatagcgaagaaatccggacgcttgacagcatcatggacgaagaacggagaattacagtc
caaggttacgtgtttgatgtggagacccgcgagctgaaaagcgggcgtacgctgtgtatc
ttcaaaattacagactacacaaatagtattttaatcaaaatgtttgcacgtgaaaaagaa
gatgcggcactaatgaagtctctgaaaaaaggaatgtgggtaaaagcacgcggaagcatt
caaaatgacactttcgtcagagatctcgtcatgatcgcaaatgatgtaaacgaaataaaa
gcaaaaacccgggaagattcggctcctgaaggagaaaaaagagtggaattgcacttgcat
tccccaatgagccaaatggatgctgttacgggtattggaaagcttgtcgaacaggcgaaa
aaatgggggcatgaggccattgctttgacggaccatgctgtcgttcaatcattccctgat
gcgtattctgccgccaaaaagcatggaattaaaatgatttacgggatggaagcgaatctc
gttgatgatggcgtgccaattgcttataacgctgcacaccgtctgcttgaggaagaaaca
tatgttgtttttgacgtcgagacgacgggactgtctgctgtatacgataccattattgag
ctggctgcagtaaaagtaaaaggcggagaaattattgataaatttgaggcgtttgcgaac
ccgcaccgtccgctttcagccacaatcatagagctgactggcatcaccgatgatatgctt
cgcgatgctccggatgtcgtagatgtgataagagatttcagagaatggattggcgatgat
atccttgtcgctcataatgcgagctttgatatgggattcttaaacgtagcttataaaaag
cttcttgaagtcgaaaaagctaaaaacccagtcattgatacgcttgagcttgggcgtttt
ctttatccggaatttaagaaccaccgtttgaacacactttgtaaaaagtttgatatcgaa
ctcacacagcatcaccgtgcgatctatgatactgaggcgactgcttatttgcttctgaaa
atgctgaaggacgcagctgaaaaaggcattcaataccatgatgagctaaatgaaaatatg
ggtcagtccaacgcttatcaaagatctagaccgtatcatgcaacattactcgctgtgaac
agcacggggcttaaaaatttatttaagcttgtgtcactttctcatattcattatttttac
agagtgcctcgtatcccgagatctcagcttgagaaatatagggaagggcttctgatcggt
tcggcttgtgacaggggagaggtttttgaagggatgatgcaaaaatcgcctgaagaggtt
gaagatgtcgcgtcattctatgattatcttgaggttcagccgcctgaagtgtaccgtcac
ttgctagagcttgaactggtccgcgatgaaaaatcgctgaaagaaattattgcgaatatc
acgaaattgggtgaaaagcttaataaaccggttgttgctacgggaaatgttcattacttg
aatgatgaggataaaatttacagaaagattttaatatcttctcaaggcggggccaatccg
ctgaacagacatgaattgccgaaagtgcatttcagaacgacagacgaaatgcttgaagca
ttttctttcttaggcgaagaaaaagcgaaggaaattgttgttaccaatacccaaaaggtt
gcttctttaatcgatgatatcaagccgattaaagatgatttgtatacaccgaaaatcgaa
ggcgccgatgaagaaatcagagaaatgagctaccagcgtgcaagaagcatttacggcgaa
cagctgcctgaaattgtcgaagcgcggattgaaaaagaattaaagagtatcattggccac
ggcttcgctgttatttacttgatctctcacaaacttgtaaaacgttcactagatgacggg
tatctcgtaggttcccgtggttctgtaggatcttcattagttgcgacgcttactgagatt
actgaggtcaacccgctgccgccgcactatgtctgctctgagtgccagcattctgagttc
tttaatgacggttctgtcggttccggttttgacttgcccgacaagatatgtcctcattgc
ggaacacctttgaaaaaagacggccatgatattccgtttgaaacattcttaggatttaaa
ggggacaaagtacctgatatcgatttgaacttctcaggggaatatcaaccgcaagcacac
aattacacaaaagtattgttcggagaagacaatgtatatcgagcgggaacaataggcaca
gttgcagaaaaaacagcctacggttatgtaaaaggctatgccggagaccataacctccac
atgcgcggggctgaagtagatcggctcgtacagggatgtacaggtgtaaaacgtacaact
ggacagcaccctggggggattatcgtagttccggattatatggatatttatgatttttca
ccgattcagttcccggcagatgccacaggttcagagtggaaaacgactcattttgatttc
cactccatccatgataacctgttaaaactggatattctcggacacgatgacccgaccgtc
attcggatgcttcaagacttaagcggaattgatccgaaaacaattccaaccgatgatcct
gaagtgatgaagattttccagggaaccgaatcactcggtgttacagaagaacagatcggc
tgtaaaacaggaactcttggaatccctgaattcggaacacgatttgtccggcagatgctt
gaagatacaaagccgacaactttttccgagctcgttcagatttcaggcctatctcacgga
actgatgtatggctcggtaatgcgcaagagctcatccacaataatatttgtgagctgagt
gaggttatcggctgccgtgacgacattatggtttatttaatctatcaaggtcttgagccg
tcccttgcctttaaaatcatggaatttgtgcgtaaaggaaaaggattaacgcctgaatgg
gaagaagaaatgaaaaataacaatgtcccagactggtacattgattcttgtaaaaagatt
aaatacatgttcccgaaagcccacgccgcggcttatgtattaatggcagtccgcattgct
tactttaaagtgcatcatgcgcttctgtattatgcggcttattttaccgttcgtgcagac
gactttgatatcgatacaatgatcaagggctctacagcaatcaaggcggtaatggaggat
attaattctaaaggacttgatgcttcaccgaaggaaaaaaaccttctgactgttttagaa
ttagcacttgaaatgtgtgagagaggctattcattccaaaaagtcgatttatatcgctcc
agcgctacagagtttattattgacggcaacagtcttatcccgccgtttaactccattcct
ggattagggacgaacgccgctctaaacattgtaaaggctcgtgaagaaggcgaattcctc
tcaaaagaagatttgcaaaagagagggaaagtgtcaaaaacgattctagagtatttagat
cgtcatggctgtcttgaatcactgcctgatcaaaaccaattgtcattgttctaa
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integrated database retrieval system
