Bacillus subtilis subsp. subtilis 168: BSU19620
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Entry
BSU19620 CDS
T00010
Symbol
yodJ
Name
(RefSeq) carboxypeptidase YodJ
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
bsu
Bacillus subtilis subsp. subtilis 168
Pathway
bsu00550
Peptidoglycan biosynthesis
bsu01100
Metabolic pathways
bsu01502
Vancomycin resistance
bsu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bsu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BSU19620 (yodJ)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSU19620 (yodJ)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BSU19620 (yodJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bsu01002
]
BSU19620 (yodJ)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bsu01011
]
BSU19620 (yodJ)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bsu01504
]
BSU19620 (yodJ)
Enzymes [BR:
bsu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
BSU19620 (yodJ)
Peptidases and inhibitors [BR:
bsu01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
BSU19620 (yodJ)
Peptidoglycan biosynthesis and degradation proteins [BR:
bsu01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
BSU19620 (yodJ)
Antimicrobial resistance genes [BR:
bsu01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
BSU19620 (yodJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
BTRD1
Peptidase_M15_4
Motif
Other DBs
NCBI-GeneID:
940023
NCBI-ProteinID:
NP_389843
Pasteur:
BG13538
UniProt:
O34866
A0A6M3ZBZ9
Structure
PDB
LinkDB
All DBs
Position
complement(2134566..2135387)
Genome browser
AA seq
273 aa
AA seq
DB search
MKKSGKWFSLAAALSVTAIVGAGCSMSNGDAQKDTKTTAETKQTEQKTADSKKSNTQNSE
FSLESQYFNDIKKVDGLETIQNPENILALVNKQYALPGNYEPSDLVIPDVEFSFEEKIQK
RYIRKEAADALKTMFDAAKKEGYELAAVSGYRSYDRQKVIFDNEVSLKGERKAKEAVAYP
GESEHQTGLAMDISSRSNGFELNEAFGSTADGKWVQDNAYKYGFIIRYPKNKEDITKYEY
EPWHLRYVGKKAAKVIQDNDLTLEEYFEKVKKI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtccggtaaatggttctcactggctgccgctctgagtgtaacggcaatagtc
ggagccggctgcagcatgtcgaacggagatgctcaaaaggatacgaaaaccacagcagaa
acaaagcaaacagaacaaaaaacagctgacagcaaaaaatcaaacactcaaaacagtgag
ttttcattggaaagccagtatttcaatgatattaaaaaagtcgatggtctggaaaccatt
caaaatccagaaaatatactcgcgcttgtcaataaacaatatgcactgcccggaaactat
gaacctagcgatcttgtcatacctgatgtagagttttcttttgaagaaaagattcaaaaa
cgttacatcagaaaagaagcggccgacgcattaaaaacaatgttcgatgctgccaaaaag
gaaggctatgaactggcagctgtctcagggtaccgttcgtatgacagacagaaagtcatt
tttgacaatgaagtaagcctaaaaggggaaaggaaggcaaaggaagcggtcgcttacccg
ggtgaaagcgagcatcaaacaggccttgcgatggacatttcgagccggagcaatggcttt
gagctaaatgaagcgttcggaagcacggcagacgggaaatgggtgcaggacaatgcttat
aaatatggctttattattcgctatccgaaaaataaagaagatatcacgaaatatgaatat
gagccatggcatctgcgctatgtaggcaaaaaagccgcaaaggtcatccaagataatgat
ttaacgcttgaagagtactttgaaaaagtgaagaaaatttaa
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