Basfia succiniciproducens: A4G13_03280
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Entry
A4G13_03280 CDS
T06488
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bsun
Basfia succiniciproducens
Pathway
bsun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4G13_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsun03400
]
A4G13_03280
Enzymes [BR:
bsun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A4G13_03280
DNA repair and recombination proteins [BR:
bsun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4G13_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
ResIII
PDDEXK_1
AAA_30
AAA_25
AAA_22
AAA_11
DUF3799
AAA_12
Barstar
Motif
Other DBs
NCBI-ProteinID:
QIM68481
LinkDB
All DBs
Position
complement(722855..726511)
Genome browser
AA seq
1218 aa
AA seq
DB search
MQKLTALDPISTPLNSTLLIEASAGTGKTFTMASLYLRLLLQAGENCFFKPLEVEQILVV
TFTEAATQELRERIRHRIHLAKKQLTQYAENKNKQVFYGTENEILADLVDSLELPVAIQR
LKIAEQNMDLAAIYTIHGFCRRMLVQYAFNSGIHFNLQLVKDETELLTRFSNELWREHFY
NLSFSLTNFIHRNLKSPTDVLQKIRKFVTSENLNVELNEPHLLQLEFNRFLSQYIEKNIN
EINQLKTAWIESENEIQRLIEKAKTQKLIKGASYKANHLPGRYEKIRQWAQDETDFSIPE
PLSKYFSQSAVDSYLTKNEPVNHAVFKQADSAVERAQSTELYVKVILYHYIQWMRDKLDR
YKASHQEKSFDDLLRLLKEAVVSPEHGNELVKLIRYQYPFAMIDEFQDTDAQQYQIFSKI
YIESAQAETGFIMIGDPKQAIYQFRGADIFTYLKAAQQAKYHFTLGKNYRSEGNLIHAVN
QLFNFSSAQPFLYENIEFSSVEPGKAQGRFILNEQQEAPLGVYLGEEPSDEQLAETCANC
ISQWLQLALRECAGIQTAEKFLPLEPKDIAVLVRNAKEAELIKNALQARQISSVYLSDKS
NVFDCNEAKELLLILQACLNPFSERNIVNAIATAIFCLTGADIQHIKQHETDWEKWIDRF
VGYQRSWRQQGVLAMLHQLFLAEQIPQKLINMPNGERRVTDLFHLAELLQEATTLNESDA
ALLRWFERQIRGENTQDENIIRLESEQQLVKIVTIHKSKGLEYNLVWLPFISAKAKVNPQ
HISTYYNAQAQAVQWDMDACHNDEVIKERLAEEMRLLYVALTRAKYHLAMALPDNFTKNW
NALLYALTRGKIGIQAKLTDEYQTKPLLDDFAQRISPANIHYYQTDEIQGGGYQQKDNHA
QYVAQEFHGKIERDWTISSFTSLTQMHEWNSQKGRHEAFNPIVTTESAVNFSLILDEAKD
IDLTFLPKINEDENNFSDIVTGYRQGYSPFDFPHGINVGTALHRFFEKNEFNQPISDEYV
KNLCQTIQLSEEWKQPLIQWIEAILTTPLFNGEPLNLAQLDKKDCIKEMQFYLKLEGRFK
LHSFNRLLQKYHTIKREPYLFDEIQGMLRGFIDLVFRHESKYYVLDYKSNFLGKDMAFYA
RSQLTDVMKNHHYDLQYLLYTLAIHRYLKQRVADYDYDSHFGGVIYCFLRGMNGRNPDYG
IYSAKPAQELIEGLDNLF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacttaccgcacttgatccgatttcaacgcccttgaattcaaccctgttaatt
gaagcttccgcaggtacggggaaaacctttaccatggcttccttgtatttgcgtttatta
ctgcaagccggtgaaaactgcttttttaagcctttagaagtggaacaaatcttagtggtc
acctttacggaagccgcaactcaagagctacgggaacgaattcgtcaccgcattcattta
gcaaaaaaacaattaacgcaatatgctgaaaataaaaataagcaggttttttacgggacg
gaaaatgagattttagcggatttagttgatagcttagaattacccgttgccattcaacga
ctgaaaattgccgagcaaaatatggatctcgccgcaatttacaccattcacggtttttgc
cgccgaatgttagtacaatatgcctttaattcgggcattcattttaatttgcagttagta
aaagatgaaaccgaattattaacccgtttcagcaatgaattatggagggaacatttttac
aacttatcctttagtctcacaaattttattcaccggaatctgaaatcaccaacggatgtg
ctgcaaaaaatcagaaaattcgtcaccagtgaaaatttaaacgtcgaactcaacgaacct
cacttattacagcttgagtttaaccgctttctctctcaatatattgaaaaaaacatcaat
gaaatcaatcaattgaaaacagcatggatagagtccgaaaatgaaattcagcggttaatc
gaaaaagcgaaaacgcaaaaattaattaaaggcgcttcttacaaagcgaatcatttgccc
ggcaggtatgaaaaaatccgccaatgggcacaggatgaaacggatttttctatccccgaa
cctttaagcaagtatttttctcaatccgccgttgattcttatctcactaaaaacgaacct
gtcaatcacgccgtttttaaacaggcggatagtgcggtagaacgggcacaatccacggaa
ttatacgtcaaagtcattttgtatcactatattcagtggatgcgtgataaattagatcgg
tataaggcttcgcaccaagagaaaagttttgacgatttattgcgtttactgaaagaagcc
gtcgtttctccggaacatggaaatgaattggttaagctgattcgttatcaatatcctttt
gccatgattgatgagtttcaggatacggatgcacagcaataccaaattttttctaaaatt
tatatcgaatcagcgcaagccgaaaccggctttattatgattggtgacccgaaacaggct
atttatcaatttcgcggcgcggatatttttacttatttaaaagctgcacaacaggcaaaa
taccattttaccttgggtaaaaattatcgttctgaaggtaatttaattcatgcggtgaat
caactttttaatttttcttcagcacaaccttttttatacgaaaatattgagttttcttcc
gtcgaaccaggaaaagctcaagggcgttttatattaaacgagcaacaagaagcaccgctt
ggcgtttatctaggtgaagaaccgagcgatgaacaactggcggaaacttgcgctaattgc
atttctcaatggttacaacttgccctgcgggaatgtgccggtattcaaaccgcggaaaaa
tttttaccgctagaaccgaaagatatcgccgttctggtacgtaacgcaaaagaagccgaa
ttaattaaaaatgcattgcaggcacggcagatttcatccgtttatttatcggataaaagc
aatgtgtttgattgtaatgaagcaaaagaattattgctgatcttgcaagcctgtttaaac
ccttttagcgaacgtaatatagtaaatgccatagctaccgctattttttgcctaaccggc
gcggacattcaacatattaaacaacatgaaacggattgggaaaagtggattgatcgcttt
gtcggctatcaacgcagctggcggcaacaaggtgtacttgctatgctgcatcaacttttt
ttagccgaacagattccgcaaaaactgattaatatgccaaacggcgaacgccgggtgact
gatttattccatttagcggaattattgcaggaagctacaacgcttaatgaaagtgatgcg
gcgctgttgcgttggtttgaacgtcaaattcgcggcgaaaatactcaagacgaaaatatc
attcgtttggagagcgaacagcaattagtcaaaatcgtcactattcataaatccaaaggg
ttggaatataacctggtttggctaccgtttatcagtgctaaagctaaagtgaacccgcaa
catatctccacttattacaatgcgcaagcgcaggctgtgcaatgggatatggatgcctgc
cataatgacgaagtgataaaagaacgtttggcggaagaaatgcgcttactttatgtggcg
ctgactagagcaaaatatcatttagcgatggcgttgcctgataactttactaaaaactgg
aacgctttgctttatgctctgactcgcggaaaaatcggcatacaagctaaattaaccgac
gaataccaaaccaagccccttttagacgactttgcacaacgtatttcgccggcaaatata
cattattatcaaacggatgaaatccaaggagggggttatcagcaaaaagataatcatgcc
caatatgtagcccaagaattccacggaaaaattgagcgggactggactataagcagtttt
acctctttaactcaaatgcacgaatggaacagtcaaaaaggcagacatgaagcctttaat
cctattgtaacgacagaaagtgcggtcaatttttctctaattttagatgaagccaaagat
attgatttaacttttttacctaaaataaacgaggacgaaaataattttagtgacattgta
acgggatatcggcaaggttattcgccttttgattttccccatggtattaatgtggggacg
gcattgcaccgtttttttgaaaaaaatgaatttaatcaaccaattagtgacgaatatgta
aaaaatttatgccaaaccatacaattaagcgaagaatggaaacagcctttaattcaatgg
attgaagcaattcttaccacgccgctatttaatggggagcctttaaatctggctcaatta
gataaaaaagactgcataaaagaaatgcaattctatttaaaactggaaggacggtttaag
ttgcattctttcaatcggttgctgcaaaaataccatacaatcaaacgagagccttattta
tttgatgaaatccaaggcatgttgagaggatttatcgatttggtttttcgtcatgaaagc
aaatattatgtgctggattacaaatcaaatttcttaggaaaagacatggcgttttatgcg
cggtcgcaattaaccgacgtaatgaaaaatcatcattatgatttgcaatatttgctttac
accttagcaattcaccgctatttaaaacaacgtgtggcggattacgattatgacagccat
ttcggcggcgtaatttattgttttttacggggtatgaacgggcgtaatccggattacggc
atttattccgcaaaacctgcgcaggaactaatcgaagggttggataatttattttag
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