Bacillus subtilis subsp. subtilis BAB-1: I653_13890
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Entry
I653_13890 CDS
T02520
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bsy
Bacillus subtilis subsp. subtilis BAB-1
Pathway
bsy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I653_13890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsy03400
]
I653_13890
Enzymes [BR:
bsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
I653_13890
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
I653_13890
DNA repair and recombination proteins [BR:
bsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I653_13890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AGI30025
LinkDB
All DBs
Position
complement(2747256..2748086)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK
FLLFHLDHYVMVSHLRMEGKYGLHQAEEPDDKHVHVIFTMTDGTQLRYRDVRKFGTMHLF
KPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVVGLGNIYVDEA
LFRAGVHPETKANQLSDKIIKTLHAEIKNTLQEAIDAGGSTVRSYINSQGEIGMFQLQHF
VYGKKDEPCKNCGTMISKIVVGGRGTHFCAKCQKKK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattaccagaggttgagacagtccggcgcactctgaccgggcttgtaaaggga
aaaacaatcaaatcggtagagatcagatggccgaatatcatcaaacggcctgccgaaccg
gaggaatttgcgcgaaaactagcaggagaaacgatacagtccatcggaagacggggaaag
tttttactgtttcatttagatcattatgttatggtttctcaccttcgaatggaaggaaaa
tacggtcttcatcaagccgaggagcctgacgataaacacgtgcatgtcatattcacgatg
acggatggaacccagcttcggtacagggatgtgcggaaatttggaaccatgcacttattt
aaaccgggagaagaagcgggcgagctcccgctttctcagttaggtccggagccggatgca
gaagaatttacgagtgcgtatttaaaagaacggcttgcgaaaacaaaccgcgctgtcaaa
actgccctactggatcaaaaaacggtagttggactagggaacatttatgtggatgaggct
cttttcagagcgggtgtccatcccgagacaaaagcaaatcaattatcagataaaataatc
aaaacccttcacgctgaaatcaaaaacactctgcaggaggcgattgatgcgggcggaagc
acagtccgttcatatatcaactcccaaggggaaatcggaatgttccagctgcagcatttt
gtgtacggaaaaaaagacgagccatgcaaaaattgcggcacgatgatttcgaaaattgtc
gttggaggaagaggcacgcacttttgcgcaaagtgccagaaaaaaaagtag
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