Bradyrhizobium symbiodeficiens: CIT39_08730
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Entry
CIT39_08730 CDS
T06284
Name
(GenBank) DUF4130 domain-containing protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT39_08730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsym03400
]
CIT39_08730
Enzymes [BR:
bsym01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CIT39_08730
DNA repair and recombination proteins [BR:
bsym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIT39_08730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AWM06522
UniProt:
A0A2U8Q975
LinkDB
All DBs
Position
complement(1913890..1915332)
Genome browser
AA seq
480 aa
AA seq
DB search
MQYITLDNETDFDGWREAARSLVLHHVQPTNVAWTVQGRDAELFAPQAPSPILAVNDGSF
KVSGKFVDLAKAAILHRDPERFAILYRLLWRLKDNHDLIEVATDPDVALATAMARAVHRD
EHKMHAFVRFREIGRERAAHYVAWFEPEHHIVELAAPFFAKRFADMPWSILTPELCAHWD
GHSLSFTPGVNKSEAPGEDRLEETWRRYYASIFNPARLKVKAMQAEMPKKYWRNLPEASI
IKPLIEDAERMTGAMIANAATDPHKPQRRPEAPMTRKTAANDLEALREEAAHCRACHLYK
DATQTVFGEGPKSANIMLVGEQPGDKEDLAGHPFVGPAGQMLDRALEEAGVDRKKVYVTN
AVKHFKFVPRGKIRLHQKPNTPEIKACRQWYEREVSAIQPDLIVAMGATAAQSVFGKITP
IGKNRGRLIDLPDGRKALVTVHPSYLLRLPDPEAKALEYRRFVEDLKIVAGLQKKAARAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacatcaccctcgacaacgaaaccgatttcgacggctggcgcgaagcagcgcgc
agcctcgtgcttcatcatgtgcagcccaccaatgtcgcctggaccgtgcaaggccgcgac
gcggaattattcgcgccgcaagcgccgtctccgatcctcgcggtgaatgacggcagcttc
aaggtatcaggcaaattcgtcgatctcgccaaggccgcgatcctgcatcgcgatcccgaa
cgctttgcgatcctctatcgcctgctctggcgcctgaaggacaatcacgatctcatcgag
gtcgcgaccgatcctgacgtcgcgttagctacggcgatggcccgagcggtccatcgcgac
gagcacaagatgcacgccttcgtccgcttccgcgagatcggcagggaacgcgccgcgcat
tacgtcgcctggttcgagccggagcatcacatcgtcgagctcgcagccccgtttttcgcc
aaacgcttcgccgacatgccctggtcgatcctgacgccggagctctgcgcacattgggac
ggtcattcgctttcgttcacaccgggtgtcaacaagagcgaggcgccgggcgaggatcgg
ctggaggagacctggcggcgctattacgccagcatcttcaatccggcgcgcttgaaggta
aaggcgatgcaggccgagatgccgaagaaatactggaggaacctgcccgaggcttcgatc
attaagcccctgatcgaggacgccgaacgcatgaccggtgccatgatcgccaatgccgca
accgatccgcacaagccccaaaggcggccggaggctccgatgactcgcaagactgccgca
aacgatctcgaagctctccgtgaggaagccgcgcattgccgcgcctgccatctttacaag
gacgcgacccagaccgtgttcggcgagggcccgaaatccgccaacatcatgctggtcggc
gaacagcccggcgacaaggaagacctcgccggccatcccttcgtcggccccgccggccag
atgctcgaccgtgcgctggaggaggccggtgtcgatcgcaagaaggtctatgtcaccaac
gcggtgaagcacttcaaattcgtgccgcgcggaaagatccgcctgcaccagaagccgaat
acgccggagatcaaagcgtgccggcagtggtatgagcgggaagtctcggccatccaaccc
gatctgatcgtggcgatgggcgctaccgccgcgcaaagcgtgttcggcaagatcacaccc
atcggaaaaaaccgaggcaggctcatcgaccttcccgacggacgcaaagcgctggtgacg
gtgcacccatcttatttgctgcggttgccagatccggaagccaaggcgctggaatatcgg
cgctttgtcgaggatttgaagatcgttgccggcttgcagaagaaagccgcgcgggccgcc
tga
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