Budorcas taxicolor (takin): 128058068
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Entry
128058068 CDS
T08909
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
128058068 (COL20A1)
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
128058068
NCBI-ProteinID:
XP_052506398
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All DBs
Position
13:complement(54078277..54100851)
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AA seq
1373 aa
AA seq
DB search
MSIRVRPHLGVGLCLYLSVTLGLSQGQASGRLRLTVLPEDRLQMKWRESEGSSLGYLVQV
KPRAGDPEQEVMLTTKTPKATVGGLSPSKGYTLQIFELTGSGNILLARREFVIEDLKSNS
VSRSGQRPLGATLEPTPSLVGSPDLKPPGALAPSQDPPTPGRPQFRCTPPMPADMIFLVD
GSWSIGHSHFQQVKDFLASVIEPFEIGPGKVQVGLTQYSGAPQTEWDLNAFGTKEEVLNA
VHNLRYRGGNTFTGLALTHVLEQNLKPRAGLRPEAAKLVILVTDGKSQDDAHAAGHVLKG
LGVDIFAVGVKNADETELRLLASQPLDITVHNVQDFPQLGTLSGLLSRLICQKVQGRSPR
RGPATLALDPPPAPTRLVLTQVTSSSILLSWSPAPQPPLKYLIVWRPSKGGAPREVVVEG
PTSSAQLHNLTSGTEYLVSVFPLYKAGVGEGLQGLATTAPLPPPQALTLASVTPKTVRLT
WQPSAEATQYLVRWSPASPKGKEERREVRVGRPEVLLDSLAPGRDYEVWVQSLRGAETSE
AQGIRARTPALATPRHLSFSDVSHDSARVSWEGTARPVRQFRVSYVSGKGGHSGQMEVPG
NATSATLGPLSSSTTYMVRVTCLYPGGSSSTLTGRLTTRKVPSPSQLSVTELPGDEVRLE
WAAAAVSGVLVYQITWMPLGEGKAREISVPGNLGTAILPGLGRHSEYEITILAYYRDGAR
SDPVSLRYTPVSQSPPSNLALASESPDSLWVSWTPPSSHVLHYRLSYALASGSGPEKSIS
IPGPRSHVTIPDLLAATKYRVLVSAIYGAGESVAVSATGRTACPALHLDGSPPGFDLMAA
FGLVEKEYASIRGVAMEPSAFGPTRTFTLFKDSQLTRRASDIHLATLPPEHTVVFLLRLL
PETPREAFALWQVASEDFQPILGVLLDAGRKSLTYFNRDPRATLQEVTFDLPEVRRIFFG
SFHKVHVAVGHSKVRLYVDCRKVAERPIGEASSLPAAGFIMLGRLAKARGPRSSSASFQL
QVLQIVCNDSWAEEDRCCELPASKEGESCPAFPSACACSSQTRGPPGPQGPPGLPGRNGA
PGEQGFPGPRGPPGVKGEKGDHGHPGLQGQPGLQGTPGKVGVQGPKGMRGLEGTAGLPGP
PGPRGFQGTAGARGSNGEQGPPGAVGPTGLPGPKGERGEKGEPQSLATIYQLVGQASHVL
KLHACTHESTRPPMPILEAPRALGTSSKARLPGEVGHGGPRPGDRGLQVGAGDQDILMGH
LARLANRGWGPKGQCPEECVQDGPPAASSEPACAPGSWTPDIRPLEQLEKRVQRLLKPPG
PGIHSPTPPGIKPHSGLSALGTLCSGLMEPRPTGPLPCHCPVPLTSTNLGTTA
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccgtgtgcgccctcacctcggagtcggcctctgtctgtatctgagtgttacc
ctggggctcagccagggacaagcgagtggccgcctgaggctgacagtgctgcctgaggac
cggctgcaaatgaagtggagagagtcagaggggagcagcctcggctacctggtgcaggtg
aagcccagggcaggggacccagagcaggaggtgatgctgaccaccaagacccccaaggcc
accgtggggggcctgagcccctccaaggggtacaccttgcagatcttcgagctcactggc
tcagggaacatcctgctggctcgcagggagtttgtgattgaggatctgaagagtaactcc
gtgagcaggagcggccagaggccactgggggcaaccctggagcccaccccctcccttgtg
gggagcccagaccttaagcccccaggggccctggccccaagccaggaccctcccacccca
ggcagaccccagttccgctgcacaccccccatgcctgcggacatgattttcctggtggat
gggtcctggagtataggccacagtcacttccagcaggtcaaagacttcctggccagcgtc
atcgagccctttgaaattgggccaggcaaagtccaagtaggcctgactcagtacagtgga
gccccccagaccgagtgggacctgaatgcctttggcaccaaggaggaggtgttgaatgct
gtgcacaacctccgctacagaggaggaaacacattcacaggcctggccctgacccacgtg
ctggagcagaacctgaagcccagagcaggtctccgtccagaggcggccaagctggtgatt
ctggtgacagatggcaagtcccaagatgatgcccatgctgctggccacgtgctcaagggt
ctgggtgtcgacatctttgctgtgggtgtgaagaatgctgacgaaactgagttgaggctt
ctggcatcccagccgctggacatcaccgtccacaacgtgcaggacttcccccagctcggc
acactctccggcctactcagccggctcatctgccagaaggtccagggcaggagcccgcgt
cggggcccagctacactggccctggacccccctccggctcccaccaggctggtcctgacc
caagtgacctcctccagcatcctcttgtcctggagcccggccccacagccgcccctcaag
tacctgattgtgtggaggccttccaagggcggcgcccccagggaggtggtggtggaaggg
cccacctcgtcagcgcagctgcacaacctgacctccggcaccgagtacctggtctctgtg
ttccccctctacaaggctggcgtcggcgagggcctgcagggcctggcgaccacagcaccc
ctgcccccaccccaggcgctgaccctggcttcagtaacacccaaaactgtccgcctcacc
tggcagccctcagcagaggccacccagtacctggtgcggtggtcacctgcctcccccaag
ggcaaggaggaaaggagagaggtgcgggtggggcggccggaggtgctgctggatagcctg
gccccgggcagggactatgaggtgtgggtgcagagccttcgaggggcagagaccagcgag
gcccagggcatccgtgccaggacccctgccctggccacccccagacacctgagcttctca
gacgtgagccatgattcagcccgcgtatcctgggagggcaccgcaagacctgtgcgccag
ttcagggtcagctacgtctccggcaagggaggccactcgggacagatggaggttcctggg
aatgccacctcggccaccctgggccccctctcctcctccaccacctacatggtccgcgtc
acctgtctctaccctgggggcagctcctctaccctgactggccgcctgaccacacggaaa
gtccccagcccgagccagctgtcggtgacagaactgcctggggatgaagttcggctcgag
tgggcggccgcagcagtgtccggcgtgctcgtctaccagatcacgtggatgcccctggga
gaggggaaagcccgtgagatttctgtcccggggaacctgggcacggccatcctgcctggc
ctgggcaggcactcagaatatgagatcaccatcctggcctactaccgggacggggcccgc
agtgaccctgtgtccctccgttacacccccgtcagccagagcccaccctccaacctagcc
ttggcctcagagtcgcctgacagcctgtgggtcagctggacacccccgagcagccacgtg
ctccactaccggctctcctacgcactggcctcaggctccggacccgagaagtcgatctcc
attccaggacccaggagccacgtgacgatccctgacctgctggcagctaccaagtaccgg
gtcctggtctcagccatctatggagcaggggagagcgtggcagtgtctgccacgggccgg
acggcctgcccagccctccacctggatggctcccccccaggctttgacctgatggcggcc
ttcgggctggtggagaaggaatatgcctccatccgcggcgtggccatggagccctcggcc
tttggtcccaccaggaccttcacgctcttcaaggactctcagctgacccgtcgggccagc
gacatccacctggccaccctgcccccggagcacacggtcgtcttcctcctgcgcctgctc
cctgagactccccgagaggcctttgcactgtggcaggtggcaagcgaggacttccagccc
atccttggggttctgctagacgctggcaggaagtcactgacctacttcaaccgtgacccc
agggccaccttgcaggaggtcaccttcgacctgcccgaagtgaggaggatattctttggg
agtttccacaaggtgcacgtggccgtgggccactccaaggtcaggctctacgtggactgc
cggaaggtggccgagaggcccatcggggaggccagcagcctgcctgctgctggcttcatc
atgctgggcaggttggccaaagcccggggcccccggagcagctcagcctcgttccagctc
caggtgctacagatcgtgtgcaatgactcctgggcagaggaggacaggtgctgtgagctc
ccagcatcgaaggagggagagtcctgtcctgccttcccatctgcctgtgcatgttcctca
cagacccgtgggcccccgggcccccaaggacctccgggcctccccgggaggaacggagcc
ccaggagagcaaggcttcccagggcccaggggtccgccaggggtcaaaggagagaagggg
gaccatggacaccccggcttgcagggccaacccggcctccagggcacccccgggaaggtt
ggcgttcagggaccgaagggaatgagaggcctggaggggactgctggactgcctggccct
ccaggccctaggggtttccaaggtactgcgggggctaggggcagcaacggcgagcaagga
cccccaggggccgtggggcccacagggctgccggggcccaagggggagcgaggagagaag
ggagagccacagtccctggccaccatctaccagcttgtgggccaggcctcgcacgtgttg
aagctccatgcctgcacccatgagagcacccggccccccatgcccatcttggaagccccc
agggcccttggcacgagcagcaaggcccggctccctggagaagtggggcatggtggcccc
cgccctggggacagaggactgcaggtgggtgcaggagaccaggacatcctcatgggacac
ctggccaggctggcgaatcggggctgggggcccaagggtcagtgcccggaggagtgcgtt
caggacggtccccctgctgcctcgagtgagcccgcatgtgcccctggatcctggacaccc
gacatccgacccctggagcagctggagaagagggtccagaggctgctgaagcctccaggc
cctggtatccacagccccacccctccagggatcaagccccactcagggctctcagccttg
ggcacattgtgttcaggcctcatggaaccccgacctactggccccttaccttgccactgc
ccagtgcctctcacctcgaccaacctgggcaccacagcctga
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