Budorcas taxicolor (takin): 128063352
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Entry
128063352 CDS
T08909
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
128063352 (SHANK1)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
128063352
NCBI-ProteinID:
XP_052512043
LinkDB
All DBs
Position
18:complement(57974033..58020930)
Genome browser
AA seq
2180 aa
AA seq
DB search
MTHSPASSEEEERHSASECPEGGSESDSSPDGPGRGPQGTRGRGSAAPGSLASIRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAVRR
RGPPGTGLTVPPALLRANSDTSMALPDWMVFAAPGTSSAGAPGPTSGPQGQAQPAAPSAK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMVSPWKKKSEYEQQPPPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFTTESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPALSSSGRLTPSPRGG
PFNPSSGGTHPASSPASFDGPAPPDTRIGSREKSLYHSGPLPPAHHHPPHHHHHHALPPQ
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGALSPSHHGSGGG
AGGPSQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVVEGEPQKGGGLPPAPS
PTSPASPQPPPPPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPSQPEA
AGGGGGGGGSSAPSPAPAVSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGG
WQNEARRRSTLFLSTDAGDEPDGGDSSLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESA
AAGSSYAGYAAGSRAYGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKES
SEGGGPPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLG
SQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSKPWRSGAPPEEPE
RLPLHVRFLENCQPRAGGAGGRAPPSEDGPGVPPPSPRRSVPPSPTSPRGSEENGLPLLV
LPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLPPVP
PPAVAAAPPTLDSTASSLTSYDSEVATLTQGAPAAPGDPPPPGPPAPAAPAPPPPQPGPD
PPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGGAGGGTGSVGGSGGASVAGG
PELLDTYVAYLDGQAFGGSGTPGPPYPPQLMTPSKLRGRALGAGGGLRPGPGGGLRDPVT
PTSPTVSVTGAGTDGLLALSGCPGSSTAGVAGGPVAVEPEGPPVPLPSASSLPRKLLPWE
EGPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGS
GDSHHGGASYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWSKPPLPPLPTGTAVSPS
AAAAPGATSPSASSSSTSARHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLP
ILPSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGMSGSLGGALSGASRSLSPTRL
LSLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLG
VTRVGHRMNIDRALKFFLER
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaagaagaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccgggagaggcccccaggggacc
cggggccggggcagcgcagcacctggtagcctggcctcgatccgaggcctccagggccgc
tccatgtccgtcccagacgacgcccacttcagcatgatggtttttaggatcggcatccct
gaccttcaccagacaaaatgcctgcgcttcaaccccgatgccaccatctggacggccaag
cagcaggtgctttgtgccctgagcgagagcctccaggatgtgctcaactatggcctgttc
cagccggccacctcgggccgggacgccaacttcctggaggaggagcgactgctgcgggaa
tatccccagtccttcgagaagggggtgccctacctggagttccgatacaagacccgtgtt
tacaagcagaccaacctggatgagaagcagctggccaagttgcacacgaagacggggttg
aagaagttcctggagtacgtgcagctcgggacatccgataaggtggcacggctgctggac
aaggggctggaccccaattatcacgactcagattcaggagagacccccctgacgctggct
gctcagactgaaggctctgtagaggtgattcgaaccctatgcctgggtggggcgcacatc
gacttccgggcccgggatggcatgactgcgctacacaaggccgcctgtgcccgccactgc
ctcgctctgacggcgctcctggatcttgggggctcccccaactacaaggaccgccgaggg
ctgactcccctgttccacacggctatggtggggggtgatccccgctgctgcgagctgctc
ctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggagattcaccag
gcctgccagcggggtcattctcagcatctggaacatctgctcttctacggagctgagcct
ggagcccagaacgcctcagggaacacggccctgcacatctgtgccctctacaataaggag
acgtgtgctaggatccttctctaccgaggggccaacaaggatgtcaagaataacagtgga
cagacccccttccaggtggcagtgatcgctgggaattttgaactcggggagctgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtatgcagtccggcga
cggggacccccgggcacagggctgacggtgccccccgcactgctgcgggccaacagtgat
accagcatggccctgcccgactggatggtgttcgctgccccggggacctcgtccgcaggg
gcccccggccccacctcagggccccagggtcaggcacagcccgccgcccccagcgccaag
ctcagcagcgggaccctgcgaagtgccagcagcccccggggcgcccgggcccgctccccg
tcccgcgggaggcaccccgaggaggccaagcgccagccccgtggacggcccagctccagc
gggacaccccgggaagggccggccgggggcacggggggctctgggggccccgggggctcc
ctgggcagccgcggaagacgcaggaaactctactcggcggtccccggacggtccttcatg
gccgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggcgaaaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcgtc
ggctggttcccctctgactgcctggaagaggtggccaaccgctcccaggaagcaaagcaa
gaaagccgaagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcatcaaa
gagaagacagttctgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggc
gccaaggcgcagacccccatcgaggagttcacccccaccccagccttcccggcactgcag
tatctggagtcggtggacgagggtggcgtggcatggcgggctggactgcgaatgggagac
ttcctcatcgaggtgaacgggcagaacgtggtgaaggtcggccaccggcaggtggtgaac
atgatccgacaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcacccg
gacatggatgaagctgttcacaagaaagcaccccagcaagctaagcggctgccgccccca
gccatctccttgcgttccaagtctatgacctccgagctggaggagatggtctccccctgg
aagaagaagagtgagtacgagcagcagccgccgccggtgcccagcatggagaaaaagagg
actgtgtatcagatggctctcaacaaactggatgaaatcttggcggcagctcagcagacc
atcagtgctagtgagagtcctgggcctggtggcctggcgtctctgggcaaacaccgaccc
aaaggcttctttaccactgagtcgagctttgatccccaccaccgctcccagccaagttac
gaacgtccttcctacctgcctcctggacccgggctcatgctccggcaaaaatctattggg
gctgcagaagacgatagaccctacctagcacccccagccatgaagttcagccgcagtctg
tctgtgcctggttcggaggacatccccccgccgcccaccacgtccccaccagagcccccc
tacagcacgcctccagccctgtcctcctccggccgcctcactccctctccccggggtggg
cccttcaatcccagctcaggtggcacccacccagcctcgtccccggcgtccttcgatggg
cccgccccccctgacacccggatagggagccgagagaagagcctgtatcacagcgggccc
ctgcccccagcccaccaccacccgccccaccaccaccaccaccacgccctgcccccccag
ccccaccaccaccacgcccacccgcctcacccgccggagatggagaccggcggctccccc
gacgaccccccaccccgcctggctctggggccccagcccagcctacgaggctggcggggc
ggcgggcccagcccgaccccaggggccctgtccccgtcgcaccacggcagcgggggcggc
gccggcggcccctcccaggctccggcgctgcgctacttccagctgcctccgcgggcggcc
agcgcggccatgtacgtgcccgcccgttccggccgcgggcgtaagggcccgctggtcaag
cagaccaaagtcgtcgaaggcgagccccagaagggcggcggcctcccgcccgccccctcg
cctacgtctccggcgtccccgcagccgccgccgccgccgccgccggccgcggccgccccg
tcggaaaagaactccatccctatccccacaatcatcatcaaggcgccgtccaccagtagc
agcggccgcagcagccaggggagcagcaccgaggcggagcccccgagccagcccgaggcc
gcgggcggcgggggcggcggcggcggctcttccgcgcccagccccgccccggccgtgtcg
cccgtgccgccgtctccctcgcccgtgcccaccccagcctcgcccagcggcccggccacc
ctggatttcaccagccagtttggagcggccctggtgggggcggctcgaagggaagggggc
tggcagaacgaagcccgccggcggtccacgctcttcctctccaccgacgcgggggacgag
cccgacggcggcgacagctcgctgggcccaggggcgcccccgggcccccggctgcgccac
tccaagtccatcgacgaaggcatgttttcggccgagccctacctccggctggagtcggcg
gccgccggcagcagctacgcgggctacgcggccggcagccgagcctacgggggtagcagc
gccttcaccagcttcctgccgccgcgacccctggtccacccgctgaccggcaaggccctg
gacccggcctccccgctcgggctggccctggccgcccgggagcgggcgctgaaggagtcc
tcggagggcggtgggcccccccagccccctccaaggcctccatcgccccgctacgaggcc
ccgccgcccaccccgcaccaccactcgccccacgcccaccacgagccagtgctgcgcctc
tggggagcctcgcccccggacccggcccgccgggagctggggtaccgggcagggctgggc
agccaggagaagtcccttccggccagcccaccggcggcccgacgctccttgctgcaccgc
ctgcctcccacagctcccggggtcgggcccctcctgctgcagctggggcccgagcctccc
gccccgcaccccggggtgagcaagccctggagatccggcgcccctccggaggagcccgag
cggctgcccctccacgtgcggttcctggagaactgccagccccgggccgggggggcgggt
ggaagggcccccccctcggaggacgggccgggggtcccgccgcccagcccgcgccgctct
gtgccgccctcgccgacctccccgcggggcagtgaagagaacgggctccccctgctggtc
ctgccgccgcccgccccctcggtggacgtggaagacggcgaattcctctttgtggagccg
ctgcccccgcccctcgagttttccaatagcttcgagaagccggagtcgcctctcacgccg
gggcctccccacccgctgccggacccacccaccccgaccacccccttgccccctgtgccg
cccccggccgtggccgccgcccctcccaccctggactcgaccgcatccagcctgacttcc
tatgacagcgaggtggcaacgctgacccagggggcccccgcggctcctggggatccccct
ccgccaggccctcccgccccagccgccccggctcccccacccccccagcctggcccagac
cctcccccgggcacggattctggtattgaggaggtggacagtcggagcagcagcgaccac
cccctggagaccatcagcagcgcctccacgctgagcagcctgtccgctgaaggtgggggc
ggcgcagggggcggaactggcagcgttggaggcagtggtggcgccagcgtggccggtggg
ccagagctcctggacacctacgtggcctacctggatggccaggccttcgggggcagtggc
actcctggccctccataccctccgcagctcatgactccctctaagctccggggccgggcg
ctcggggccggcggaggcctgcggccgggacccggtgggggactgcgagaccctgtcact
cccaccagccccactgtctcagtgacgggggcgggaaccgatgggctgctggccctgagc
ggttgtccgggatcctcgacggcaggcgtggctggcggccccgtggctgtagagccagaa
ggtccgccagtgcccttgccatcggcctcctccctgcctcggaagctgctgccctgggag
gagggcccgggcccgccgccgccccctctgccggggcccttagcccagcctcaggcctca
gccttggccactgtaaaagccagcatcatcagtgaactcagctccaagcttcagcagttt
gggggctcctcggcagctggtggcgctctgccgtgggcccggggaggcagcgggggaagc
ggggacagccaccacgggggagccagctacgttcccgagcggacttcctccctgcagcgg
cagagactctcggaagactcccagtcctcgctcctctccaaacctgtgagcagcctgttt
cagaactggtccaaaccacctctgccgccactccccacgggaaccgcggtgtccccttca
gccgctgcagccccgggggccacctccccatcggcttcctcctcctccacgtccgcccgc
cacctccagggtgtggagttcgagatgcgcccacctttgctccgccgggcccccagcccc
tcattgctgcccgcctcggagcacaaggtcagccctgcgccccggccctcgtccctaccc
atcctgccttccggacccctctacccgggcctctttgacatccgaggctcccccaccgga
ggggcaggaggctcggccgaccccttcgcccccgtctttgtaccgccgcaccccgggatg
tccgggagtctcggcggggccttgtcaggggcctcccgctccctctcaccgacccgcctg
ctttccctgcccccggacaagccgttcggcgcgaaacctctgggcttctggaccaagttc
gatgtggctgactggctagagtggctgggcttggccgaacaccgggcccggttcctggac
cacgagatcgatggctcccaccttcccgccttgaccaaggaggactacgtcgatttgggg
gtgaccagggtgggacaccgcatgaacatcgaccgggctctcaagtttttcctggagagg
tga
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