Budorcas taxicolor (takin): 128065257
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Entry
128065257 CDS
T08909
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04151
PI3K-Akt signaling pathway
btax04510
Focal adhesion
btax04512
ECM-receptor interaction
btax04611
Platelet activation
btax04820
Cytoskeleton in muscle cells
btax04926
Relaxin signaling pathway
btax04933
AGE-RAGE signaling pathway in diabetic complications
btax04974
Protein digestion and absorption
btax05146
Amoebiasis
btax05165
Human papillomavirus infection
btax05205
Proteoglycans in cancer
btax05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
128065257 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128065257 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128065257 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128065257 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
128065257 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
128065257 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
128065257 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
128065257 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
128065257 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
128065257 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
128065257 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
128065257 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
btax00536
]
128065257 (COL1A1)
Glycosaminoglycan binding proteins [BR:
btax00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128065257 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
128065257
NCBI-ProteinID:
XP_052514368
LinkDB
All DBs
Position
19:36171981..36189115
Genome browser
AA seq
1463 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEGQEEDIPPVTCVQNGLRYHDRDVWKPVPCQI
CVCDNGNVLCDDVICDELKDCPNAKVPTDECCPVCPEGQESTTDQETTGVEGPKGDTGPR
GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGISVPGPM
GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP
GERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQM
GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPR
GSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQ
GPSGPPGPKGNSGEPGAPGSKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPAGLP
GPPGERGGPGSRGFPGSDGVAGPKGPAGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLT
GSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVP
GPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQ
GVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQ
GAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDK
GETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPP
GPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPA
GKEGSKGPRGETGPAGRAGEVGPPGPPGPAGEKGAPGADGPAGAPGTPGPQGIAGQRGVV
GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE
GSPGRDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPV
GARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR
GPPGSAGTPGKDGLNGLPGPIGPPGPRGRTGDAGPAGPPGPPGPPGPPGPPSGGYDLSFL
PQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRD
LKMCHPDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKDK
RHVWYGESMTGGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQT
GNLKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIID
VAPLDVGAPDQEFGFDIGSVCFL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaggaagaaggccaagaagaagacatcccaccagtcacctgc
gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgtgccctgccagatc
tgtgtctgcgacaacggcaacgtgctgtgcgatgacgtgatctgcgacgaacttaaggac
tgtcctaacgccaaagtccccacggacgaatgctgccccgtctgccccgaaggccaggaa
tcaaccacggaccaagaaaccactggagtcgagggacccaaaggagacactggcccccga
ggcccaaggggacccgccggcccccctggccgagatggcatccctggacaacctggactt
cccggaccccctggaccccccggacctcccggaccccctggcctcggaggaaactttgct
ccccagttgtcttacggctatgatgagaaatcaacaggaatttccgtgcctggtcccatg
ggtccttctggtcctcgtggtctccctggcccccctggcgcacctggtccccaaggtttc
caaggcccccctggtgagcctggcgagcccggagcctcaggtcccatgggtccccgtggt
ccccctggcccccctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcct
ggtgagcgcgggcctcccggacctcagggtgctcggggattgcctggaacagctggcctc
cctggaatgaagggacacagaggtttcagtggtttggatggtgccaagggagatgctggt
cctgctggccccaagggtgagcctggtagccctggtgaaaatggagctcctggtcagatg
ggcccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggtgct
cgaggaaatgatggtgctactggtgctgctggcccccctggccccactggccccgctggt
cctcctggtttccctggtgctgtgggtgctaagggtgaagctggtccccaaggaccccga
ggttctgaaggtccccagggtgtacgtggcgagcctggcccccctggccctgctggtgct
gctggccctgctggcaaccctggtgctgatggacagcctggtgctaaaggagccaatggc
gctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggaccccag
ggccccagtggcccccctggtcccaagggtaacagcggtgagcccggcgctcctggcagc
aaaggagacactggcgccaagggagagcccggtcccactggtattcaaggcccccctggc
cccgctggggaggaaggaaagcgaggagcccgaggtgaacctggacctgctggcctgcct
ggaccccctggcgagcgtggcggacctggaagccgtggtttccctggctctgacggtgtt
gctggtcccaagggtcctgctggtgaacgcggtgctcctggccctgctggccccaaaggg
tctcctggtgaagctggtcgccccggtgaagctggtctgcccggtgccaagggtctgact
ggaagccctggcagcccgggtcctgatggcaaaactggcccccctggtcccgccggtcaa
gatggccgccctggacccccaggccctcccggtgcccgtggtcaggctggcgtgatgggt
ttccctggacctaaaggtgctgctggagagcctggaaaagctggagagcgaggtgttcct
ggaccccctggcgctgttggtcctgctggcaaagacggagaagctggagctcagggaccc
ccaggacctgctggccccgctggtgagagaggcgaacaaggccctgctggctcccctgga
ttccagggtctccccggccctgctggtcctcctggtgaagcaggcaaacctggtgaacag
ggtgttcctggagaccttggtgcccccggcccctctggagcaagaggcgagagaggtttc
cccggcgagcgtggtgtgcaagggccgcccggtcctgcaggtccccgtggagccaatggt
gcccctggcaacgatggtgctaagggtgatgctggtgcccctggagcccccggtagccag
ggtgcccctggccttcaaggaatgcctggtgaacgaggtgcagctggccttccaggccct
aagggtgacagaggggatgctggtcccaaaggtgctgatggtgctcctggcaaagatggc
gtccgtggtctgactggtcccatcggtcctcctggccccgctggtgcccctggtgacaag
ggtgaaactggtcctagcggcccagccggtcccactggagctcgtggcgcccccggtgac
cgtggtgagcctggtccccccggccctgctggcttcgctggcccccctggtgctgatggc
caacctggtgctaaaggcgaacctggtgatgctggtgctaaaggtgacgctgggcccccc
gggcctgctgggcctgctggaccccctggccccattggtaacgttggtgctcccggaccc
aaaggtgctcgcggcagcgctggcccccctggtgctactggtttcccaggtgctgctggc
cgagtcggtccccccggcccctctggaaatgctggaccccctggccctcctggccctgct
ggcaaagaaggcagcaaaggcccccgtggtgagactggccccgctgggcgtgccggtgaa
gtcggtccccctggtccccctggccccgctggtgagaaaggagcccctggtgctgacgga
cctgctggcgctcctggcactcctggacctcagggtattgctggacagcgtggtgtggtc
ggcctgcccggtcagagaggagaaagaggcttccctggtcttcctggcccctctggtgaa
cccggcaaacaaggtccttctggagcaagtggtgaacgtggcccccctggtcccatgggc
ccccctggattggctggaccccctggcgagtctggacgtgagggagctcctggtgctgaa
ggatcccctggacgagatggtgctcctggcgccaagggtgaccgtggtgagaccggccct
gctggacctcctggtgctcctggtgctcccggtgcccctggccctgtcgggcctgctggc
aagagtggtgatcgtggtgagactggtcctgctggtcctgctggtcccgttggccccgtt
ggtgcccgtggccccgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaa
cagggcgacagaggcattaagggtcaccgtggcttctccggtctccagggtccccctggc
cctcccggctctcctggtgagcaaggtccttctggagcctctggtcctgctggtccccgc
ggtccccctggctctgctggtactcctggcaaagatggactcaatggtctcccaggcccc
atcggtccccctgggcctcgaggtcgcactggtgatgctggtcctgctggtcctcccggc
cctcctggaccccctggtccccccggtcctcccagcggtggctacgacttgagcttcctg
ccccagccacctcaagagaaggctcacgatggtggccgctactaccgggctgatgatgcc
aatgtggtccgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcag
atcgagaacatccggagccctgagggcagccgcaagaaccccgcccgcacctgccgtgac
ctcaagatgtgccaccccgactggaagagcggagaatactggattgaccccaaccaaggc
tgcaacctggatgccattaaggtcttctgcaacatggagactggtgagacctgtgtgtac
cccactcagcccagcgtggcccagaagaactggtacatcagcaagaaccccaaggacaag
aggcacgtctggtacggcgagagcatgaccggcggattccagttcgagtacggcggccag
ggctccgatcctgccgatgtggccatccagctgactttcctgcgcctgatgtccaccgag
gcctcccagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcagacc
ggcaacctcaagaaggccctgctcctccagggctccaacgagatcgagatccgggccgag
ggcaacagccgcttcacctacagcgtcacctacgatggctgcacgagtcacaccggagcc
tggggcaagacagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgat
gtggctcccttggacgttggcgccccagaccaggaatttggcttcgacatcggctctgtc
tgcttcctgtaa
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integrated database retrieval system
