Bacillus thuringiensis serovar chinensis CT-43: CT43_CH4411
Help
Entry
CT43_CH4411 CDS
T01838
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
btc
Bacillus thuringiensis serovar chinensis CT-43
Pathway
btc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CT43_CH4411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btc03400
]
CT43_CH4411
Enzymes [BR:
btc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CT43_CH4411
DNA repair and recombination proteins [BR:
btc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CT43_CH4411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
DEAD
T2SSE
AAA
AAA_16
nSTAND3
AAA_29
AAA_12
AAA_18
AAA_28
TsaE
DUF4926
Zeta_toxin
Rad17
UvrD_C
AAA_17
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AEA18072
LinkDB
All DBs
Position
complement(4374585..4376921)
Genome browser
AA seq
778 aa
AA seq
DB search
MGNQHAMDLFEEEKKFIKAQVLHTIFHNEENLYSVVSMKVIETNETYDEKKVMINGHFPR
MHEDEVFTLTGHFKDHPKYGKQYMVETFKKELPQTKAGMVQYLASDLFKGIGKRTAEKIV
DHLGEHAISKIMDDPEALNGVVNKQKAQEIYETIVEHQGLEKVMSFLNGYGFGTKLSIKI
YQQYKEMTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHDDRVRAGCFYTLENVS
LQLGHVYMRKDQLVRETMSLLNNQEGRVTEEDIIGCIETMQSEGKVIIEEERVYLATLFY
SEKGVVKSIRRLMNQEETPSFPEAEVLKTLGEIEEQLNVQYAPFQQEAIQTALHKPMMLL
TGGPGTGKTTVIKGIVEMYASLHGLSLNPNEYSDDNPFPILLTAPTGRAAKRMSESTGLP
ACTIHRLLGWTPEGSFQRNETDPVQGKLLIIDEFSMVDIWLANQLFKSLPTNIQVIVVGD
EDQLPSVGPGQVLKDLLNAGAVPTVKLTEIYRQAEGSSVIQLAHAIKDGTLPPDLAQNKK
DRSFISCTGAQIVEVVKKVCENAKTKGFSARDVQVLAPMYRGPAGINVLNEALQQVFNPK
REKSKEIQYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIVSVFYAKENVEQQDMIIVSFD
GIEVTYTKPDLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKF
LIICGEEVAFQSGVNRLDDAMRQTTLASRLQESQGEVQMVTVNGEEMDVENISPYDFM
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcaacatgcaatggatttgtttgaggaagagaaaaaatttataaaagcgcaa
gttcttcataccattttccacaacgaagaaaacctctattccgttgtcagtatgaaagtc
attgaaacgaatgaaacgtatgacgaaaagaaagtaatgataaacggtcattttccccgc
atgcatgaagatgaagtgtttacattgacaggtcactttaaggaccatccaaagtatgga
aaacaatatatggttgaaacatttaaaaaagaattgccgcaaacaaaagcaggtatggtg
caatatttagcgagtgatttatttaaagggataggaaagcgtacagcggaaaaaattgtg
gatcatctcggggaacatgctatttctaaaattatggatgaccctgaggcgttaaatggt
gttgttaacaaacaaaaggctcaggaaatatatgagacaattgttgaacatcaaggatta
gaaaaagtaatgagctttttaaatggttacggttttggaacgaaactttctattaagatt
taccagcaatataaagagatgacattagaagtgattcgtaataatccgtatcaacttatt
gaagaagtggacgggattggttttggacgagcggatgatatagggcgtgcgttagggata
tcgggtaatcacgacgaccgtgtacgagcgggatgtttttacacattagagaatgtctca
ttgcaacttggtcacgtttatatgaggaaagatcaacttgtaagagaaacgatgtcactt
ttaaacaatcaagaaggaagagtgactgaagaagatattataggttgtattgaaacgatg
caaagtgaagggaaagttatcatagaagaagaacgagtgtatttagcaactttattctac
tctgaaaaaggtgttgtaaagtctattcgtcgattgatgaatcaagaggaaacaccttca
tttcctgaagcagaagtgttaaaaacattaggtgaaattgaagaacagttgaatgtacaa
tatgcaccgtttcagcaagaagcgattcaaacggcacttcataaaccgatgatgttatta
acaggtggaccaggaacaggaaaaacaaccgttattaaagggattgttgaaatgtatgcg
tcacttcacggattatcgttaaatccgaatgaatacagtgatgataatccatttccaata
ctattaacagctccaacaggaagagcagcgaagcggatgagtgaatcgacaggacttcca
gcttgcacaattcaccgtttgcttggctggacgccagaaggatctttccagcgtaatgaa
acggatcctgtccaaggtaagctccttattatcgatgaattttcaatggttgatatttgg
ctcgcaaatcagctatttaagtcgctaccaacgaatattcaagttatcgttgtaggtgat
gaagatcagttgccatctgtaggacctggacaagtattaaaagatttattaaatgcaggt
gcagttccgacagtgaagcttactgaaatttatcgtcaagcagaaggctcatctgttatt
caacttgcccatgcgatcaaagacggcacactcccgccagatttagcgcaaaataaaaaa
gatcgttcgtttatcagctgtacaggggctcaaattgttgaggttgtgaaaaaagtttgc
gaaaacgctaaaacaaaaggctttagtgcaagggatgttcaagtattagcaccgatgtac
cgcgggcctgctggtattaatgtattaaacgaagcgctgcaacaagtatttaacccgaaa
agggaaaagagtaaagaaatccagtacggtgatgttgtataccgaagaggcgataaagta
ctgcaactcgttaatcagccggagagccaagtgtttaatggggatatcggagaaattgtt
tcggtgttttatgcgaaagaaaacgttgagcaacaagatatgattatcgtttcatttgat
ggaattgaggtaacgtatacaaagccggatttaaatcaaattacacatgcatattgttgt
tcgattcataaatcacaaggtagtgaatttccgattgttattatgccgattgtgaaaagt
tacaaccgtatgttacgccgtaatttaatttacacgggcattacaagaagtaagaagttc
cttattatttgcggggaggaagtagctttccaatctggtgtaaatcgccttgatgatgca
atgcgtcaaacaactttagctagtcgcttgcaggaatcacaaggagaagtacagatggtc
acagttaatggcgaggaaatggacgtggaaaacatttcaccgtatgatttcatgtaa
DBGET
integrated database retrieval system
