Burkholderia thailandensis MSMB121: BTI_3473
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Entry
BTI_3473 CDS
T02644
Name
(GenBank) sigma-54 interaction domain protein
Organism
btd
Burkholderia thailandensis MSMB121
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
Sigma54_activ_2
Sigma54_activat
HTH_AraC
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AGK46868
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Position
1:complement(3828422..3830005)
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AA seq
527 aa
AA seq
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MEAILRNVYRPYRRLPDLLELLMRAFARHLDLGGASLRLRDVGVLRLHRSGERFDLVWLD
GKGAGAHADDDIRAVAHSARFPVTYAGEPLGMLTLSATEGAARSDAFAAHGAAFAHRCAL
LFQRYGVQRWARQRLSRSLLLVGMSEPLHRIEIFVEKASYSLLPVLLTGEFGTEKAPLAA
ALHCCGPRRDGPFIEVNCADPADDPAQWFRQAAGGTLFFNGIDELAPRLQNQVRQYLHSR
LGQWLVVPGECEVRVIASTTSDLRRCVEEGRFSQALLAELDFLSATVPTLRQRENDIAPL
VAAALEHHGYVAERKCSDALLEICEHYAWPENVYELERVIARLAVMTGDAPIGRDDVALH
VPWMIDRPHGERVGAAHGHDRDDGTSRPAIETNAAALQSSVLPAHWARCAMTRNAAELAR
LHKALRKALLYLGEHYANPISMEQLAQHAHVSPSHLSYLFRHTLNVAFKPLLQHIRIEKA
KEMLMRHDCPRVTEVALSVGFGDLSHFEKSFRRIVGSSPREFRGSAA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcgatattgcgaaacgtttatcgaccgtatcggcgattgccggatttgctcgaa
ttgttgatgcgcgcgttcgctcgacatctggacctgggcggcgcgtcattgcgattgcgc
gacgtcggcgtgctgcggttgcatcgcagcggcgagcggttcgatctcgtctggctcgac
gggaagggcgccggcgcccacgccgacgacgacatccgcgcggtcgcgcattcggcgcgg
tttccggtgacctatgcgggagagccgctcggcatgctgacgttgagcgcgacggagggc
gccgcgcggtcggacgccttcgccgcgcacggcgcggcctttgcgcatcgctgcgcgctc
ctgttccagcgctacggcgtgcaacgctgggcccggcagcggctgagccgaagcttgttg
ctcgtgggcatgtccgagccgttgcatcgcattgagatattcgtcgaaaaggcgtcgtac
agcctgttgcccgtgttgctcaccggcgagttcggcaccgagaaggcgccgttggcggcg
gcgctgcattgctgcgggccgagacgtgacgggccgttcatcgaagtcaactgcgccgat
ccggcggacgatccggcgcaatggttcaggcaggcggcgggcggcacgttgttcttcaac
ggcatcgacgagcttgctccccggcttcagaaccaggtgcggcagtatctgcattcgcgg
ctcgggcaatggctggtggtgccgggcgagtgcgaggtgcgcgtgatcgcgtcgacgacg
tccgatttgcgacgatgcgtggaggaagggcgattctcgcaagcgctgctggccgagctg
gacttcttgtcggcgacggtgccgacgcttcgccagcgcgaaaacgacatcgcgcccctc
gtcgccgcggcgctcgagcatcatggctacgtcgccgagcgcaagtgcagcgacgcactg
ctcgagatatgcgagcactacgcgtggccggaaaacgtctatgagctcgagcgcgtgatc
gcgcgcctggcggtcatgacgggcgatgcccccattggccgcgacgacgtcgcgcttcat
gtgccgtggatgattgatcggccgcacggcgagcgcgtcggcgcggcgcacggccacgat
cgggacgacgggacgtcacggcccgcgatcgagacgaatgccgccgcgttgcaatcttcg
gtgctgccggcccactgggcgcgatgcgcaatgacgcgcaacgccgcggagctggcgcga
ttgcataaggcgctgcgcaaggcgctgctttatctcggcgagcattacgccaatccgatt
tcgatggagcagttggcgcagcacgcgcacgtgagcccgtcgcatttgagctatctgttc
cgtcacacgctgaatgtcgcgttcaagccgttgcttcagcacattcgcatcgagaaggcg
aaggaaatgctgatgcgccacgactgtccgcgtgtgaccgaggttgcgctgagcgtcggc
ttcggcgacttgagccacttcgaaaaaagcttccggcgcatcgtgggatcgagcccgcgc
gagttcaggggctcggcggcgtga
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