KEGG   Burkholderia thailandensis MSMB121: BTI_3778
Entry
BTI_3778          CDS       T02644                                 
Name
(GenBank) DEAD/H associated family protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
btd  Burkholderia thailandensis MSMB121
Brite
KEGG Orthology (KO) [BR:btd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:btd03400]
    BTI_3778
Enzymes [BR:btd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BTI_3778
    5.6.2.6  RNA 3'-5' helicase
     BTI_3778
DNA repair and recombination proteins [BR:btd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BTI_3778
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C Lhr_WH DprA_WH ResIII AAA_25
Other DBs
NCBI-ProteinID: AGK50069
LinkDB
Position
2:208969..213465
AA seq 1498 aa
MDITPTRPAAGALGAFHPVVAAWFSGTFAAPTTAQALAWPHIKAGRSTLVAAPTGSGKTL
TAFLSALDDLVRDALAHDGALPDETLVVYVSPLKALSNDIHVNLDVPLAGIAAEIARRGL
PVPQIRTAVRTGDTTQAERVAHRKHAPHILVTTPESLYVLLSSESGRRMLASTRTVIVDE
IHALATAKRGSHLALSLERLDALVGRKLPRIGLSATQKPVEAVARFLVGGRDDAPLDCAI
VDTGHTRTRDLALELPPVPLGPVMANDVWERLYDRIAELAAAHRTTLVFVNTRRMAERAA
RHLADRLGADAIAAHHGSLAKEHRFDAEQRLKHGRLKLLVATASLELGIDIGDVDLVCQL
GSPRGIAPFLQRVGRSGHRVGGVPKGRLFPLSRDELVECAALLDCVRRGELDLLRIPRAP
LDVLAQQLVAEVACREWDEHALYRCVTQAAPYATLARETFDDVLKMLAEGFTSRRGARAA
YLHRDVVAHTVRGRRGARLAAVTSGGTIPDNADYAVLLEPQGVNIGTVNEDFAVESLAGD
VFQLGNQSYRIIRIETGRVRVEDAHGQAPNIPFWLGEAPARSDELSAGVARLRAQVDALL
ARGDAAGAPAPAAAPAPRRLAPVLAWLTGELGLDAEAARQIADYLARARAALGALPTQDT
LVMERFFDESGGMQLVIHSPFGSRINRAWGLALRKRFCRSFNFELQAAATDDALILSLSL
AHSFALDEVWRYLRASSAEHVLIQALLDAPLFTARWRWNATTSLALPRFAGGRKVAPQLQ
RMRSDDLLATVFPDQVACAENIVGEREVPKHPLVDQTLDDCLHDAMDTEGWLALLRRIET
DGVALVARDLSAPSPLAAEILNAKPYAFLDDAPLEERRTQAVLARRWTDPESADDLGALD
AGAIDSVRDEAWPLVRDDDEMHDALIGLACVADDEIDSHDGWRACAARLAAGRRAARLAL
DGGRGLWIAAERVACMRALYGEDVAPDPPLAPPPGFDAPWERDAALVDVIRARLTGFGPL
TADALAAPLALPAASVAIALAALEREGYAMRGRFTPGARDDEWCERHLLARIHRYTVKRL
RREIEPVELADFMRFLFHWQRVAPDTRGLGVDALAPVVHQLEGFEAAASAWEDEILPARL
ADYVTGGLDEPCRAGKLTWTRLGAPPKAASAPVKTTPVVLLPRRELAVWQALRDPAALPA
LSARAERVRATLAAYGAMFFDELTAHARLLPVELERALGELVAAGLVNADSFAGLRALIR
PAAQRSAHRSSRVRRGGALIGGMDDAGRWALVQRLPLAPLDFDEDDDDASGGDARRSGAS
VADADADARIARAMRAAPPPTGRHAIAPAALEHVARTLLRRYGVVFWRILACEAEWMPGW
RELLPVYRRLEARGEIRGGRFVAGLAGEQFALPDAIPILRELRRRPAEGLLLCVSGADPL
NLTGTLLPGERVPALAGNRLLFRDGVPIAALVGGQFVYARELDAAGQDDARARLARHR
NT seq 4497 nt   +upstreamnt  +downstreamnt
atggacatcacccccacccgccccgccgccggcgcgctcggcgcgttccaccccgtcgtc
gccgcctggttctccggcacgttcgccgcgcccaccaccgcgcaggcgctcgcgtggccg
cacatcaaggccggccgctcgacgctcgtcgccgcgccgacgggctccggcaagacgctc
accgcgttcctgtccgcgctcgacgatctcgtgcgcgacgcgctcgcgcacgacggcgcg
ctgccggacgagacgctcgtcgtctacgtgtcgccgctgaaggcgctgtcgaacgacatc
cacgtcaacctcgacgtgccgctcgccggcatcgccgccgagatcgcgcggcgcgggctg
cccgtgccgcagatccgcaccgcggtgcgcaccggcgacaccacgcaggccgagcgcgtc
gcgcaccgcaagcacgcgccgcacattctcgtcacgaccccggaatcgctgtacgtgctg
ctgtcgtccgaatcgggccggcggatgctcgcgagcacgcgcaccgtgatcgtcgacgaa
atccacgcgctcgcgacagccaagcgcggcagccatctcgcgctgtcgctcgagcggctc
gacgcgctcgtcggccgcaagctgccgcgcatcgggttgtccgcgacgcaaaagccggtc
gaggcggtcgcgcgctttctcgtcggcggccgcgacgacgcgccgctcgattgcgcgatc
gtcgataccggccacacgcgcacgcgcgatctcgcgctcgaattgccgcccgttccgctc
gggccggtgatggcgaacgacgtgtgggaacgcctctacgaccgcatcgcggaactggcc
gccgcgcaccggacgacgctcgtgttcgtcaacacgcgccggatggccgagcgcgcggcg
cgccatctcgcggaccggctcggcgcggacgcgatcgccgcgcaccacggcagcctcgcg
aaggagcaccgcttcgacgccgagcagcgcctgaagcacggcaggctgaagctgctcgtc
gcgaccgcgtcgctcgagctcggcatcgacatcggcgacgtcgacctcgtctgccagctc
ggctcgccgcgcggcatcgcgccgttcctgcagcgcgtcggacgctccgggcaccgcgtc
ggcggcgtgccgaaggggcggctctttccgctgtcgcgcgacgagctcgtcgaatgcgcg
gcgctcctcgactgcgtgcggcgcggcgagctcgatctgctgcgcatcccgcgcgcgccg
ctcgacgtgctcgcgcagcagctcgtcgccgaagtcgcctgccgcgaatgggacgagcac
gcgctctatcgctgcgtgacgcaggccgcgccctacgcgacgctcgcgcgcgagacgttc
gacgacgtgctgaagatgctcgccgagggcttcacgagccggcgcggcgcgcgcgccgcg
tacctgcatcgcgacgtcgtcgcgcacacggtgcgcgggcggcgcggcgcgcggctcgcg
gccgtcacgtcgggcggcacgatccccgacaacgccgactacgcggtgctgctcgagccg
cagggcgtgaacatcggcaccgtcaacgaggactttgcggtcgagagcctcgcgggcgac
gtgttccagctcggcaaccagtcgtaccggatcatccggatcgagacggggcgcgtgcgc
gtcgaggatgcgcacgggcaggcgccgaacatcccgttctggctcggcgaggcgcccgcg
cgcagcgatgagctgtcggcgggggtcgcgcggctgcgcgcgcaggtcgacgcgctgctt
gcgcgcggcgatgcggccggcgcgcccgcgcccgcggccgcacccgcgccgcgccgcctc
gcgcccgtgctcgcgtggctgacgggcgagctcggcctcgacgccgaggccgcgcggcag
atcgccgactacctcgcgcgcgcccgtgcggcgctcggcgcgctgccgacgcaggacacg
ctcgtgatggagcgcttcttcgacgaatcgggcggcatgcagctcgtgatccattcgccg
tttggcagccggatcaaccgcgcgtggggcctcgcgctgcgcaagcgcttctgccgcagc
ttcaacttcgagctgcaggcggccgcgaccgacgacgcgctgatcctctcgctgtcgctc
gcgcacagcttcgcgctcgacgaggtgtggcgctacctgcgcgcgtcgagcgccgagcac
gtgctgatccaggcgctcctcgacgcgccgctcttcaccgcgcgctggcgctggaacgcg
acgacgtcgctcgcgctgccgcgcttcgcgggcggccgcaaggtcgcgccgcaactgcag
cggatgaggagcgacgatctgctcgcgaccgtgttccccgatcaggtcgcatgcgcggag
aacatcgtcggcgagcgcgaagtgccgaagcatccgctcgtcgaccagacgctcgacgac
tgcctgcacgacgcgatggacaccgaaggctggctcgcgctgctgcggcggatcgagacg
gacggcgtcgcgctcgtcgcgcgcgatctgagcgcgccgtcgccgctcgcggccgagatc
ctgaacgcgaagccttacgcgttcctcgacgacgcgccgctcgaagagcgccgcacgcaa
gcggtgctcgcgcggcgctggaccgatccggaatcggccgacgatctcggcgcgctcgac
gcgggcgcgatcgactcggtgcgcgacgaggcgtggccgctcgtgcgcgacgacgacgag
atgcacgacgcgctcatcgggctcgcatgcgtcgccgacgatgaaatcgattcgcacgac
ggctggcgcgcgtgcgccgcgcggctcgcggcgggccggcgcgcggcgcggctcgcgctc
gacggcggccgcgggctgtggattgccgccgagcgcgtcgcgtgcatgcgcgcgctgtac
ggcgaggacgtcgcgcccgatccgccgcttgccccgccgcccggcttcgacgcgccgtgg
gagcgcgacgccgcgctcgtcgacgtgatccgcgcgcgcctcacgggcttcggcccgctc
acggccgacgcgctcgccgcgccgctcgcgctgcccgccgcgtcggtcgcgatcgcgctc
gccgcgctcgagcgcgagggctacgcgatgcgcggacgcttcacgccgggcgcgcgcgac
gacgaatggtgcgagcggcacctgctcgcgcgcatccatcgctatacggtcaagcgcctg
cgccgcgagatcgagcccgtcgagctcgcggatttcatgcgcttcctgttccactggcag
cgcgtcgcgcccgatacgcgcggcttgggcgtggacgcgctcgcgccggtcgtccatcag
ctcgaaggcttcgaggcggccgcgagcgcgtgggaagacgagatcctgcccgcgcggctc
gccgactacgtgacaggcggcctcgacgagccgtgtcgcgccggcaagctgacgtggacg
cggctcggcgcgccgccgaaggccgcgagcgcgccggtgaagacgacgcccgtcgtgctg
ctgccgcgccgcgagctcgcggtctggcaggcgctgcgcgatccggccgcgctgccggcg
ctgtccgcgcgcgccgagcgcgtgcgcgcgacgcttgccgcgtatggcgcgatgttcttc
gacgagctgaccgcgcacgcgcgcctgttgcccgtcgagctcgagcgcgcgctcggcgag
ctcgtcgcggcgggcctcgtcaatgcggacagcttcgcgggcctgcgcgcgctgatccgg
ccggccgcgcagcgcagcgcgcaccggtcgtcgcgcgtgcggcgcggcggcgcgctgatc
ggcgggatggacgacgcggggcgctgggcgctcgtgcagcggctgccgctcgcgccgctc
gattttgatgaagacgacgatgacgcatccggaggcgacgcgcgccgctccggcgcatcc
gtcgccgatgccgatgccgatgcgcgcatcgcgcgcgcgatgcgtgcggcgccgccgccg
acgggccgccatgcgatcgcgcccgccgcgctcgagcacgtcgcgcggacgctgctgcgc
cgctacggcgtcgtgttctggcgcatcctcgcctgcgaggccgaatggatgccgggctgg
cgcgagttgctgcccgtctaccggcggctcgaggcgcgcggcgagatccgcggcggccgc
ttcgtcgcgggcctcgcgggcgagcagttcgcgctgcccgacgcgatcccgatcctgcgc
gagctccgccgtcggccggccgaagggttgctgctgtgcgtgagcggggccgatccgctc
aatctgacaggcacgctgctgcccggcgagcgcgtgcccgcgctcgcgggcaaccggctc
ctgttccgcgacggcgtgccgatcgccgcgctcgtcggcgggcagttcgtctatgcgcgc
gagctcgacgcagccgggcaggacgacgcgcgcgcgaggcttgcgcggcatcggtaa

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