Bacillus tequilensis: G4P54_03595
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Entry
G4P54_03595 CDS
T07089
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bteq
Bacillus tequilensis
Pathway
bteq03030
DNA replication
bteq03410
Base excision repair
bteq03420
Nucleotide excision repair
bteq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bteq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G4P54_03595 (ligA)
03410 Base excision repair
G4P54_03595 (ligA)
03420 Nucleotide excision repair
G4P54_03595 (ligA)
03430 Mismatch repair
G4P54_03595 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bteq03032
]
G4P54_03595 (ligA)
03400 DNA repair and recombination proteins [BR:
bteq03400
]
G4P54_03595 (ligA)
Enzymes [BR:
bteq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
G4P54_03595 (ligA)
DNA replication proteins [BR:
bteq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G4P54_03595 (ligA)
DNA repair and recombination proteins [BR:
bteq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
G4P54_03595 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G4P54_03595 (ligA)
MMR (mismatch excision repair)
DNA ligase
G4P54_03595 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G4P54_03595 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
RNA_pol_A_CTD
BRCT_2
5_3_exonuc
zf-NADH-PPase
HHH_8
HNOB
zf-IS66
HHH_3
zf-tcix
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QIW78957
UniProt:
A0A6H0WHG9
LinkDB
All DBs
Position
685866..687872
Genome browser
AA seq
668 aa
AA seq
DB search
MDKETAKQRADELRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSP
TQRVGGAVLEAFQKVTHGTPMLSLGNAFNADDLRDFDRRVRQAVGDDVAYNVELKIDGLA
VSLRYEDGYFVRGATRGDGTTGEDITENLKTIRSIPLKMNRKLSIEVRGEAYMPKRSFEA
LNEERIRNEEEPFANPRNAAAGSLRQLDPKIAAKRNLDIFVYSIAELDEMGVETQSQGLD
FLDEIGFKTNQERKKCGSIEEVIALIDELQAKRADLPYEIDGIVIKVDSLDQQEELGFTA
KSPRWAIAYKFPAEEVVTKLLDIELNVGRTGVITPTAVLEPVKVAGTTVSRASLHNEDLI
KEKDIRILDKVVVKKAGDIIPEVVNVLVEQRTGEEKEFSMPTECPECGSELVRIEGEVAL
RCINPECPAQIREGLIHFVSRNAMNIDGLGERVITQLFKEDLVHNVADLYKLTKEQVIQL
ERMGEKSTENLISSIQKSKENSLERLLFGLGIRFIGSKAAKTLAMHFESLENLKKASKEE
LLAIDEIGEKMADAVITYFHKEEMLELLDELQELGVNTLYKGPKKVKAEDSDSYFAGKTI
VLTGKLEQLSRNDAKAQIEALGGKLTGSVSKNTDLVIAGEAAGSKLTKAQELNIEVWNEE
QLMGELKK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaacagcgaagcagcgggcagacgaactgcgccgcaccatcaacaagtat
agctatgaatattacaccttagatgaaccgagcgtccctgatgccgaatacgacagattg
atgcaggagctgattgcgatcgaggaggagcacccagacctcagaacgcctgactctcct
acgcagcgtgtcggcggtgccgtgcttgaagcgtttcagaaagtcacccacggcacgcca
atgcttagtctcggcaacgcctttaatgctgatgatcttcgtgatttcgaccgccgggtg
cgccaagccgtcggcgacgatgtggcgtataatgtggagctgaaaatagacggtcttgct
gtttctctccgttatgaagacggctattttgtcagaggggccacaagaggtgacggcacg
acgggggaggatattacggagaatctgaagacgatccgcagtatccccctcaaaatgaac
cgtaagctgtcgatcgaagtgcgcggagaggcgtatatgccgaagcgttcgtttgaagcg
ctcaatgaggaacggatcagaaatgaagaagaaccgtttgccaatccgcgaaatgcagcc
gctggctcactcagacagcttgatccgaaaattgcggcgaaacgaaacctcgatatcttc
gtctacagtatagcggagcttgacgagatgggtgtggagacacaaagccaggggcttgat
tttctcgacgaaatcggatttaaaacgaatcaggaacgtaagaaatgcggcagcatagag
gaagtcattgcgctgatcgatgagcttcaggcgaagcgtgctgacctcccgtacgaaatt
gacggcatcgtcattaaagtcgattctcttgatcagcaggaggagcttggtttcaccgcg
aaaagcccgcgctgggcgatcgcgtataaatttcctgctgaagaggttgtaacaaagctt
ctcgatatcgaattaaatgtcggcagaacgggtgtgattacgccgaccgcggtattggag
ccggtaaaagttgccggcacaacggtctcaagagcatcccttcataacgaagatttaatt
aaagagaaggatattcggattttggataaagtcgtcgtcaaaaaagcgggcgatatcatt
ccggaagtcgtgaatgtcctcgttgaacagcggacaggagaagaaaaggaattcagcatg
ccaacggagtgtcctgaatgcggcagtgagctcgtccgcatcgaaggagaagtggcgctt
cgctgtattaatccggaatgcccggcgcaaatccgggaagggctgatccatttcgtttcc
cgcaatgccatgaacattgacgggctcggcgagcgagtcatcacacagctgtttaaggaa
gaccttgtccacaatgtggcggacttgtataagctgacgaaggaacaggtcatccagctc
gaacgcatgggcgaaaagtccactgaaaacctgatcagctctatccaaaagtcaaaagaa
aattcgttagagcgtctgctgttcggtcttggcatccgctttatcggatcaaaggcagca
aaaacgctcgccatgcattttgaaagccttgaaaacctgaaaaaagcctcaaaagaggaa
cttctcgcaatcgatgaaatcggtgaaaaaatggctgacgcggtcatcacttattttcat
aaagaagaaatgcttgaactcctcgatgaacttcaagagctgggcgtaaacacactctac
aaaggcccgaaaaaagtaaaagcagaggacagcgattcttactttgcgggtaaaaccatt
gttctgacaggaaagcttgaacaactgtcaagaaacgatgccaaagcgcaaatcgaagcg
ctcggcggcaaactgaccggcagcgtcagcaaaaacacagacttggtcatcgctggagaa
gcggcgggaagcaagctgacaaaagcgcaagagctgaacattgaagtatggaatgaagaa
cagttaatgggagagctaaagaaataa
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