Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_24230
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Entry
YBT1520_24230 CDS
T03435
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bthr
Bacillus thuringiensis serovar kurstaki YBT-1520
Pathway
bthr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YBT1520_24230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthr03400
]
YBT1520_24230
Enzymes [BR:
bthr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
YBT1520_24230
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
YBT1520_24230
DNA repair and recombination proteins [BR:
bthr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YBT1520_24230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AHZ53425
LinkDB
All DBs
Position
complement(4641813..4642643)
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AA seq
276 aa
AA seq
DB search
MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAEIFKEMLKGEKIENIKRRGK
FLLLYVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTDGTELHYKDVRKFGTMHLF
KKGEEMNQMPLADLGPEPFDPEMTPQYLQERLQKTNRKIKVVLLDQRLLVGLGNIYVDEV
LFRSQIHPEREASSLTVEEIERIYEATVTTLGEAVKRGGSTIRTYINSQGQIGSFQELLN
VYGKKGEPCVTCGTILEKTVVGGRGTHYCPICQPRI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaacgtcagacggacacttgaaaatcttgtaacagga
aaaacgattgaagatgttattgttacttatccaaaaatagtgaaacgaccggatgatgca
gaaatctttaaagaaatgctaaaaggcgagaagattgaaaatataaagcgaagaggaaag
tttttgcttttatatgtaacgaattatgttattgtttcacatttgcgtatggaaggtaag
tttttactacatcaagaggatgagccgattgataaacatacgcacgtccgtttcttattt
acagatggaacggaattacattataaagatgtgagaaagtttggtacgatgcatctcttt
aagaaaggtgaagaaatgaaccaaatgcctcttgcggacttaggtccggagccatttgat
cctgaaatgacaccgcagtatttacaagaaagattacaaaagacaaatcgtaaaataaaa
gttgtgctactggatcagcgtcttttagtagggcttggaaatatatatgtagatgaagtt
ttattccgttctcaaattcatccggaacgagaagcttcgtctttaacagtagaagaaatt
gagcgaatttatgaggctaccgttacaacgctaggcgaagcagtaaagcgtggcggaagt
acaattcggacgtatatcaactcacaagggcaaattggttcgttccaagaactcctaaat
gtatatgggaaaaaaggagagccgtgcgtaacttgtggcacgatattagaaaaaacagtt
gttggcgggcgaggaacgcattactgcccaatttgtcagcctagaatatag
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