Caldibacillus thermoamylovorans: CQJ30_05830
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Entry
CQJ30_05830 CDS
T06263
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bthv
Caldibacillus thermoamylovorans
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthv03400
]
CQJ30_05830
DNA repair and recombination proteins [BR:
bthv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CQJ30_05830
Archaeal homologous recombinant proteins
CQJ30_05830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
BLOC1_2
ABC_tran
AAA_21
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AWI11719
UniProt:
A0A2U8EA54
LinkDB
All DBs
Position
1191108..1194200
Genome browser
AA seq
1030 aa
AA seq
DB search
MRPIKLTMIAFGPYKDREVIDFTELDENRIFVISGNTGAGKTTIFDAICFVLYGAASGED
RSDVKGLRSDFADDDVHTSVELEFELRGHLYRIKRQLSHVKKGNKTATGEAYEFYEKIGE
QEIPCVDRQIVSEINKKVEELVGLTRDQFIQIVMLPQGEFRKLLTSQTENKEEILRKIFK
TERYTLISQRLKEKKQQAEDDFTREKQTRDRYFSDIQTLLPARDESTLFATLAQENFNTY
QVLDGLDEESVYYEKSIEANKQNEKSAEAAYHKKLEEYHKAEGINEEFKNLEEKENHLKE
ERAKEPIFKEKKVQLENAERAGKIESYENQVNEWRKDEKEKSARFQLIEKSYHRTVQTLQ
TAEASYKEQESKKAEREEIRKKLDGYKEFLPLVQEIDMKKQELMEQQKNVQNLAKNRDSI
VSTIQEQKEKKQKLNDQIKGLEIRVDTLPDKQQKLIELRNQATVLQGYLKLQRKQAEMDK
DVKTKENQYSTAKQKYETMEAAWINGQAIILASHLHDGEACPVCGSTEHPNKAGGHVDVP
TKDALDAAKIEFNQIDGAYRDSKAKYNTLKAELEEKAIEVRQLGFHVQNVEATYIKMVED
GKKLSAEVDLLQSEKEKLARLKTQLEKLEANLSRMEKQQESATEDYQLHNTAYQANKAVY
QEQLNRIPEDLRQLSVLKAKIADTEAIQKTMEQAWEQAQKQIQSAKEEVAKAKVNLENAK
LALDESRKKKEKAEQQFIEMLHKAGFSNEETYRQAKMAETSQKQLKAEIESYYNNIASLQ
LLVKDLHETLKDKHKIDLNELKTELDQLKQAFDQAQEQLRQSEQYLQHVKKLQKNIFEAN
ERVTEFERRKNIVADLYDVIRGQNDKKISFERYLQIEFLEQILIAANERLKRLSNGQYVL
LRSERQEARGKQSGLGLDIYDSYTGQTRDVKTLSGGEKFNASLSLALGMADVIQSYQGGV
SIDTMFIDEGFGSLDEESLTKAIDTLIDLQQTGRMIGIISHVQELKNAIPAILEVNKTKE
GYSKTQFVIK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaattaaactgaccatgatcgcattcggaccatataaagatcgggaagtcatt
gattttaccgagctggatgaaaatcgaatatttgtcatatccggtaatacgggtgccggg
aaaacaacgatctttgatgccatttgttttgttctatacggagcggccagtggggaagat
cgcagtgatgtaaaaggactgcgtagtgactttgccgatgatgatgtacatacttctgtt
gaattagaatttgaattgcgtggtcatttatatcgaatcaaaaggcagctctcccatgtg
aaaaaaggaaacaaaacagcaacgggcgaggcctacgaattttacgaaaagataggagaa
caagagattccgtgtgtggatcggcaaattgtttccgagattaataaaaaggtagaagaa
ttagtcggtttaacgcgtgatcaatttattcaaatcgtcatgcttccacaaggcgagttc
cggaaactcctgacatcgcaaacggaaaataaagaggaaatactccgaaaaatttttaaa
accgaacgctatacacttattagccaacgattaaaagaaaagaaacaacaggcagaggat
gattttactcgggaaaaacaaacgcgtgaccgctatttttccgatattcaaactttattg
ccggcacgggatgaatcaactttatttgcaactcttgcacaagaaaattttaatacctac
caagttttagacggcttagatgaagaatctgtttattatgagaagtccattgaagcaaat
aaacaaaacgaaaaatcagctgaagcagcctatcataaaaaacttgaagagtaccataag
gcagaagggattaatgaggaatttaaaaatctggaagaaaaagaaaatcatcttaaagaa
gaaagagcgaaagagccaatttttaaagagaagaaagttcagttggaaaatgcagagcgg
gcaggaaaaattgaaagctatgaaaaccaagtgaatgaatggcgcaaagatgaaaaggaa
aagtctgctcgctttcaattgatagaaaaatcttatcatcgtaccgttcaaactttgcaa
accgcggaagcttcatataaggaacaggaaagtaaaaaggctgagcgagaagagataagg
aaaaagctagacggttataaagagtttttacctttagtccaagagatcgacatgaaaaaa
caagaacttatggaacaacaaaaaaatgttcaaaacctggctaaaaatcgggattctatt
gtcagcacaattcaagagcaaaaagaaaagaaacagaaattaaacgatcaaattaagggg
ttggagattcgagtagatacattaccggataaacaacagaagttaattgaactacggaat
caggcaaccgtgttacaaggttatttaaaactacaacgaaaacaagcagaaatggataaa
gatgtaaagacgaaagagaatcaatatagcacagcgaaacaaaaatacgaaacaatggaa
gccgcttggatcaatggtcaagcaattattctcgcttcccatttacatgatggtgaagct
tgtccggtttgcggaagcacagaacatccgaataaagcaggtggtcatgttgatgtacca
acaaaagatgcgttggatgctgcaaaaattgaattcaaccaaattgatggagcctatagg
gacagtaaagcaaaatataatactttgaaggcagagcttgaagaaaaggcaattgaagtt
cgtcagttgggcttccatgttcaaaatgttgaagcaacttatataaaaatggttgaagat
gggaaaaaattaagtgcagaagttgatttattgcaatcggaaaaagaaaagttagctcgt
ttaaagacacaacttgaaaaattggaagcaaacttaagtcggatggaaaaacaacaagaa
tctgcgacggaagactaccaattacacaatactgcctatcaagcaaataaagctgtctat
caagaacaattaaaccggattccggaagatttacgacaactatccgtcctaaaggcaaaa
atcgctgatacagaagcgattcaaaagacaatggaacaagcttgggaacaggcacaaaaa
caaatacaatcagcgaaagaagaagtcgccaaagcaaaggtaaacttagaaaatgcaaaa
ctcgctttggatgaaagccgtaagaaaaaagaaaaagcggaacaacaatttattgaaatg
ttgcataaagccgggttttcgaatgaagaaacatatcgtcaggcaaaaatggcagaaaca
agccaaaaacagttaaaagcggaaattgaatcttattataacaatattgcttcgttacag
ctcctggtgaaagatttgcatgaaacattaaaagataaacataaaattgatttaaacgag
ttaaaaaccgaactggatcaattaaaacaagccttcgatcaggcacaagaacagttaaga
caatcagaacagtatttacagcatgtaaaaaagttgcagaaaaacatttttgaagcaaat
gagcgtgtgacagaatttgaaagacggaaaaacattgtcgcagatctctatgatgtgatt
cgtggacaaaatgataaaaagatttcttttgagcgctatttacaaattgaatttctggag
caaattctgattgctgccaatgaacggctaaagcgtttatcaaatggtcaatatgtgtta
cttcgcagtgagcggcaagaagcaagagggaaacaaagcggccttggactcgatatatat
gattcctacacgggacaaacacgtgatgtaaaaacattatccggcggtgaaaagttcaat
gcgtccttgtcacttgctctcggtatggcagacgtgattcaaagttatcaaggcggcgtg
tcgatcgatacgatgtttattgatgagggatttggttcactggatgaggaatccttaaca
aaggccattgatacattaatcgacttacaacaaaccggtcgaatgattgggattatttcc
catgttcaagagctgaaaaatgcaatccctgcgatcttggaagtcaataaaacgaaggaa
ggatacagtaaaacacagttcgttattaagtag
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