Caldibacillus thermoamylovorans: CQJ30_13490
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Entry
CQJ30_13490 CDS
T06263
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bthv
Caldibacillus thermoamylovorans
Pathway
bthv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bthv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CQJ30_13490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bthv03400
]
CQJ30_13490
Enzymes [BR:
bthv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CQJ30_13490
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CQJ30_13490
DNA repair and recombination proteins [BR:
bthv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CQJ30_13490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR
Auto_anti-p27
zinc-ribbons_6
HscB_4_cys
RNHCP
DUF3475
Motif
Other DBs
NCBI-ProteinID:
AWI13082
UniProt:
A0A2U8EEL0
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All DBs
Position
complement(2756904..2757737)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETIKRTLEAIVLGKTIKDVKVFWPKIIKNPPDVEEFIVLLKGQTIQTMGRRGK
FLIFYMNDVALVSHLRMEGKYGLYPKDEPFDKHTHVIFSFTDGTELRYRDVRKFGTMQIF
PIGEEMNHLPLSQLGPEPFAKEFTTAYFAKSLAKTARMIKPVLLDQTIVTGLGNIYVDEA
LYRAKIHPERLANSLSKSEVKRLREAIIATLADAVEKGGSTIRSYVNSQGQIGMFQLELN
AYAQEGKPCKNCGTPIKKIKVGGRGTHFCPNCQKVKI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagttgaaacaatcaaacgaacacttgaggcaatcgtcctcggg
aaaacaatcaaggatgtaaaagtattttggccaaagataataaaaaacccgccagatgtt
gaagaatttatcgttttattaaaagggcaaacgatacaaacaatgggaagaaggggaaag
tttctcattttttacatgaatgatgttgcactcgtctctcatttacggatggaaggaaaa
tacggactctacccgaaagatgaaccttttgataaacacactcatgtcattttttcattt
accgatgggactgaattgcgatatcgggatgttcgaaagtttggaacgatgcaaattttt
ccgatcggtgaagaaatgaaccatttgccgctcagtcaactgggaccggaaccgtttgcc
aaagagtttacaacagcctactttgcaaaatcactagcaaaaacggcgagaatgattaag
ccggttctccttgatcaaacaattgttacaggactcggcaatatttatgtggacgaagct
ttgtaccgggccaaaatacatcccgaacggcttgccaattcattatcaaaatctgaagtt
aaaagattgagagaggccatcattgccactctagcagatgcagtcgaaaaagggggaagt
accatccgttcctatgtgaattcccaagggcagataggtatgttccaattggagttaaat
gcctatgctcaggaagggaaaccgtgcaaaaactgtggcacccctattaaaaaaataaaa
gtcggcgggcgtggtactcatttttgcccaaactgccaaaaagtaaaaatataa
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