Burkholderia thailandensis E444: BTJ_5085
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Entry
BTJ_5085 CDS
T03112
Name
(GenBank) bacterial type II/III secretion system short domain protein
Organism
btj
Burkholderia thailandensis E444
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin_N
Motif
Other DBs
NCBI-ProteinID:
AHI81589
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Position
2:2096283..2098082
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AA seq
599 aa
AA seq
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MTRRAAASAAAVALALASHAPALHAVPLAWPLARFDYRVGPVSAVGALSELSRRSGVAID
IDAHAPCRLDVRDALAPQRFVDWVARTCGLASYYDGAVLQLVAPDAFERAAVRLNYATPA
ELRATLARQRIVDARWRPGYDDAARIVRVAGPPRYVALVLAAARALDEAAQARVRTATRA
FRLRARAAADRTVSGDAGDAALPGLATRLRRRLEQDGAVPPAAPGVREFTAPLPIVDADA
RSNTVLIRDVPARLARDARLVAQLDTLPASIRIDAFGATLSPAQLDALGLRWPDDAHALA
ASRAAGDARDASRSSARIRPAGASRLSGAPRAADSRRASAAPDASANSGASRASGASGIP
GAFGAPNAVGASEPPESAGALRIAIASAPDGCTATRARIAELAAHGDASIDADGSTLTLP
DGSADFGRLRQAFVASGDGGARSLDARRNGFAMRITPHETAQPERYALDMRIVERWTDGG
RTPGGPSRETVSGVTLAAGECGALALPLAAGRGEQRLVLVTLRVMPADPARVPPPASPSA
PARRTPAAAGATATARAPDAEKPAVRSHAASRAHPPAPPPLAPPSDGLGFRTQTRLLGN
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcggcgcgcggccgcgtcggctgccgccgtggcgctcgcgctcgcgagccatgcg
ccggcgctccacgcggtgccgctcgcatggccgctcgcgcgcttcgactatcgcgtcggc
ccggtgagcgccgtcggcgcgttgagcgagctgagccgccgctccggcgttgcaatcgac
atcgacgcgcatgcgccgtgccggctcgacgtgcgcgacgcccttgcgccgcagcgcttc
gtcgactgggtcgcacgcacgtgcgggctcgcgtcgtattacgacggcgcggtgttgcag
ctcgtcgcgcccgacgcgttcgagcgcgcggcggtgcggctcaattacgcgacgcccgcc
gagctgcgcgcgacgctcgcgcggcagcggatcgtcgacgcgcgctggcggcccggctac
gacgatgcggcgcgaatcgtgcgcgtcgccggcccgccgcgctatgtcgcgctcgtgctc
gccgccgcgcgcgcgctcgacgaggccgcgcaggcgcgcgtgcgcaccgccacgcgcgcg
ttccggctgcgcgcgcgcgcggcggccgaccgcacggtgagcggcgatgcgggcgacgca
gcgctgccggggctcgcgacgcggctgcgccgccggctcgaacaggacggcgccgtgccg
cccgcggcgccgggcgtgcgcgaattcaccgcgccgctgccgatcgtcgacgcggacgca
cgctcgaacaccgtgctgattcgcgacgtgcccgcgcggctcgcgcgcgatgcacggctc
gtcgcgcaactcgacacgctgcccgcgtcgatacggatcgacgcgttcggcgcgacgctc
tcgcccgcgcagctcgacgcgctcgggctgcggtggcccgacgacgcgcacgctttggcg
gcgtcgcgcgcggcgggcgatgcgcgcgacgcgtcgcgctcgtcggcgcgaatccggccg
gcgggcgcatcccgcctatccggcgccccgcgtgcggcggattcgcgtcgcgcgtccgct
gcgcccgatgcatccgccaattccggcgcatcccgcgcatcgggcgcatccggaataccg
ggcgcattcggcgcgcccaacgccgtcggcgcgtcggagccgcccgaatccgcgggcgct
ttgcgcatcgcgatcgcttccgcgccggacggctgcacggcgacgcgcgcgcgcatcgcc
gagctcgccgcgcacggcgacgcatcgatcgacgccgacggctcgacgctgacgctgccc
gacggcagcgcggacttcggccgtctgcggcaggcgttcgtcgcgtcgggggacggcggc
gcgcgctcgctcgatgcgcggcgcaacggtttcgcgatgcggatcacgccgcatgagacc
gcgcagccggagcgctacgcgctcgacatgcggatcgtcgagcgctggaccgacggcggc
cgcacgcccggcgggccgtcgcgcgaaaccgtgtccggcgtgacgctcgcggcgggggaa
tgcggggcgctcgcgctgccgcttgccgccgggcgcggcgagcagcggctcgtgctggtg
acgctgcgcgtgatgccggccgatccggcgcgtgtgccgccgccggcgtcgccgagcgcg
ccggcgcggcgcacgccggccgcggccggcgcgaccgcaacggctcgcgcgcccgacgcc
gagaagcccgcggtgcgctcgcatgcggcgtcacgcgcgcatccgccggcgccgccgccc
cttgcaccgccgtccgacggcctcggcttcaggacgcagacccgcctgctcggcaattga
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