Bacillus thuringiensis HD-789: BTF1_17035
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Entry
BTF1_17035 CDS
T02411
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
btn
Bacillus thuringiensis HD-789
Pathway
btn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTF1_17035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btn03019
]
BTF1_17035
Messenger RNA biogenesis [BR:
btn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BTF1_17035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AFQ27578
UniProt:
A0A9W3JQ47
LinkDB
All DBs
Position
complement(3319796..3321466)
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AA seq
556 aa
AA seq
DB search
MKRKENESVKVFALGGVGEIGKNMYCVEIDSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEVVYYG
ERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIFIVEKG
DVIAFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaagagaatgagtctgttaaagtatttgctcttggtggagtaggtgaaatc
gggaaaaacatgtactgtgttgaaattgattctgaaatctttattgtggatgcagggtta
atgttcccgggagatgaaatgtttggaattgatatcgttattcctgatattacatattta
gtggaaaaccaagagcgagtaaagggtttatttattactcacggtcatgaagatcatatt
ggtggtattgtttacgtacttcgtaaattatctattccagtgtatgcaacgaaattaaca
gtaggacttatacaagaaaaacttggcgaagcgggtatgttaggtcgtgtagacttaaaa
acaatcgattcaaattcaacagtagagtttaatactacaacggtgtcattctttggaacg
acacatagtattccagattctgttggtgtttgtttccatacatcaaaaggtgcaatcgta
tatacaggagactttaaattcgatcaaactccaattggaaatagtggagcagaccttggg
aaaatggctcaaattggaaatgaaggcgtactttgcttattatctgatagtacaaacgca
gagcgcccaggttatacaggttctgaaaaagaagttggtgtagaaatttctaaagtgttc
tacggcgcagaaggtcgtattatcgttgcttcatttgcatcgaatgtacatcgtattcaa
caagtatttgatgcagctgccgaaacagggcgaaaagtagcggtagtaggacgtagtatg
gtgaaagtagtagacattgcaagacgtcttggttatttagatgttccagaaggtatggtt
atttcattacaagaagtagacaacttcccagagaaaaaggtagctattttaacgacaggt
agtcaaggtgaaccgatggctgctctatctagaatggcaaaacaagcacataaacaaatt
tcaattcgtaaaggtgatactgttatcattgctgcttcgccaattccgggtaatgaaata
tctgtatcaaaaattattgatttgttatttagagctggagctgaagttgtttattacggc
gaaagaaaagttcatgtttcaggtcacggtagccaagaagaattaaaattaatgttaaat
ttaatgaaaccgaagtactttgtacccgtacatggtgagttccgtatgcaaaaagcacat
gcgtatttagctgaagatgtaggtattacaagagaaaatatctttatcgtagaaaaaggc
gatgtaattgcttttggtgacgatgaagcgaacttagtcggtaaagtacaagctggtaat
gttttaattgatggattaggtgtaggtgacgttggtaatatcgttcttcgagatagaaag
atgttatctcaagatggaatattagtagtagttgtaacgcttggtaaagatgaaaagaaa
attatctctggtccagaaatcatttcacgtggtttcgtatatgttcgtgagtcagaagcg
ttaattgaacgatctacagagattgtacgtatgattgttgagcagtcaattaaagaatat
tcgattgaatggtcaatgttaaaacaaaatattcgtgaattattaggacagttcttgtac
gaagagacaaagagaaaacctatgattttaccgattattatggaagtataa
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