Bacillus thuringiensis HD-789: BTF1_17325
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Entry
BTF1_17325 CDS
T02411
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
btn
Bacillus thuringiensis HD-789
Pathway
btn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTF1_17325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btn03019
]
BTF1_17325
03016 Transfer RNA biogenesis [BR:
btn03016
]
BTF1_17325
Enzymes [BR:
btn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BTF1_17325
Messenger RNA biogenesis [BR:
btn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BTF1_17325
Transfer RNA biogenesis [BR:
btn03016
]
Prokaryotic type
tRNA degradation factors
BTF1_17325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
KorB
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
AFQ27634
UniProt:
A0A9W3JQ78
LinkDB
All DBs
Position
complement(3370826..3372964)
Genome browser
AA seq
712 aa
AA seq
DB search
MSQEKQVFSIDLAGRQLTVETGQLAKQANGAVLVRYGDTAVLSTATASKEAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSV
DQDCSSEMAAMLGSSLALSISDIPFEGPIAGATVGRINGEFVINPTVEQQEQSDIHLVVA
GTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKEKSEVKLYEVDA
DLNQAVREMAEKDMHSAIQVHEKHAREDAINEVKKRVIEHYEAEEADADTLGQVNEILYK
IVKEEVRRLITVEKIRPDGRKGDEIRPLASEVGILSRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEK
DFPYTVRLVSEVLESNGSTSQASICGSTLAMMDAGVPLKAPVAGIAMGLVKSGEHYTILS
DIQGMEDHLGDMDFKVAGTAQGVTALQMDIKIDGLSREILEEALQQAKIGRVHILNHMLS
VIAEPRTELSAYAPKIIIMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
INQEMNDKAKKIIEDIVREVQVGEIYEGKVKRVEKFGAFVELFSGKDGLVHISELALERV
GKVEDVVKIGDVITVKVIEIDKQGRVNLSRKVLLKEEQEKEAAKEEDKQEQQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaaaagcaagtcttctcgatagatttagctggtcgccagctaacagttgaa
actggtcagcttgccaaacaagcgaacggagcagtattagtaagatatggcgatacagcg
gttctatctacagcaactgcatcaaaagaagctaaaaatgtagattttttcccacttaca
gtaaactatgaagagcgtttatatgcagtcggaaaaattcctggcggttttattaagcgt
gaaggtcgtccaagtgaaaaagcaattttggcaagtcgtttaatcgaccgtccaattcgt
ccgctattcgcagatggtttccgtaacgaagtgcaagttgtcagcattgtaatgagtgtt
gatcaagattgttcttctgaaatggcagctatgcttggttcttcattagcgttatcgatt
tcagatattccatttgaaggtccaatcgctggtgcgacagttggtcgtattaatggcgaa
ttcgttattaatccaacagtagaacagcaagaacaaagtgatatccacttagttgtagct
ggtacgaaagatgcgattaacatggttgaagcaggagcagatcaagtgcctgaagaaaca
atgttagaagcaattatgtttggtcatgacgaaattaaacgtttaattgcattccaagaa
gagattgtacaagctgtaggtaaagagaaatcagaagtgaaactttatgaagttgacgct
gatcttaatcaagctgtacgtgaaatggctgagaaggatatgcattctgcaattcaagta
catgagaaacatgcacgtgaagatgcaattaacgaagtgaaaaagcgtgtaattgagcat
tacgaagctgaagaagctgacgctgatacattaggacaagtaaatgagattttatataaa
attgtaaaagaagaagtacgtcgtcttattacagttgaaaaaattcgcccagatggccgt
aaaggtgacgaaatccgtcctttagcatcagaggttggtattttatctcgtacacacggt
tctggtttattcacacgtggacaaacacaagcattaagtatttgtacattaggtgcatta
ggcgatgtgcaaattttagatggtcttggtgtagaagaatcaaaacgctttatgcaccat
tacaatttcccatcatttagtgttggtgaaacaagaccgatgcgtggaccaggtcgtcgt
gaaattggtcacggggcactaggagagcgcgcacttgagcctgtaattccatctgaaaaa
gatttcccatacacagtacgccttgtatctgaagtattagaatcaaatggttctacttca
caagcaagtatttgtggtagtactttagcaatgatggatgcgggtgttccacttaaagct
ccagttgcaggtattgcaatgggtctggttaaatctggtgagcattacacaattttatct
gatattcaaggtatggaagatcatttaggtgatatggactttaaagtagcaggtacagca
caaggtgtaactgcactgcaaatggacattaaaatcgatggtttatcacgtgagatttta
gaagaggcattacaacaagcgaaaattggtcgtgtgcacattctaaatcatatgttatct
gttattgcagagccacgtactgaattatcagcttacgctccaaagattattataatgaca
attaacccagataaaatccgtgacgttattggaccaagcggtaaacaaatcaataaaatt
attgaagaaactggtgttaaaattgacatcgagcaagatggtacagtattcatttcatca
ataaatcaagaaatgaacgacaaagctaagaagattatcgaagatatcgttcgcgaagta
caagtaggtgagatctacgaaggaaaagtgaaacgtgttgagaaattcggtgctttcgtt
gaattattcagcggtaaagatggattagttcatatttctgaacttgcacttgagcgtgta
ggtaaagtagaagacgttgtgaaaatcggtgatgtaattacagttaaagttatcgagatt
gacaagcaaggtcgcgtaaatctatctagaaaagtattgctaaaagaagagcaagaaaaa
gaagctgctaaagaagaagacaaacaagagcagcaataa
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