Bordetella trematum: SAMEA390648701116
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Entry
SAMEA390648701116 CDS
T04322
Symbol
prfC
Name
(GenBank) peptide chain release factor 3
KO
K02837
peptide chain release factor 3
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
btrm03012
]
SAMEA390648701116 (prfC)
Translation factors [BR:
btrm03012
]
Prokaryotic type
Release factors
SAMEA390648701116 (prfC)
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
Roc
Motif
Other DBs
NCBI-ProteinID:
SAI68159
UniProt:
A0A157SCR1
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All DBs
Position
1:1183624..1185231
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AA seq
535 aa
AA seq
DB search
MNLTQEVARRRTFAIISHPDAGKTTLTEKLLLFAGAIQIAGSVKARKASRHASSDWMEIE
KQRGISVASSVMQMEYRDCIINLLDTPGHQDFSEDTYRVLTAVDAALMVIDAGNGVEPQT
KRLLQVCRARNTPIITFINKLDREVREPLELLSEIESHLGMDTVPFSWPVGMGKSFGGVF
DIRRDRMRLFRPGQERRDDDDAFIQGLNNPEISQRFGQAFEQASGEIELITEASPPFDHA
AFLAGKQTPVFFGSAINNFGVQEVLDALVELAPAPGPRHAMEREVQPEEPKFSGVVFKVQ
ANMDPAHRDRVAFVRVSSGRFERGMRLKVARTNKEMRPNNVVSFLSQRRELLDEAYAGDV
IGIPNHGVLQLGDVLTEGETLHFTGLPFFAPELFQAVEVKDPLRTKQLRVGLTQLGEEGA
IQVFRPEVAGGALLLGAVGQLQFEVVAHRLKTEYGVDARLMPSRYTMARWITSENPKALR
KFMDANAAHIAYDVVDAAAFLIGSPAQLRVAEELYPEVKFHAMREHSGKVFGEQA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcactcaagaagtcgcgcggcgacgcactttcgccatcatttcccaccccgac
gcgggcaagaccacgctgacggaaaaactgctgctgttcgcaggcgccatccagatcgcc
ggcagcgtgaaggctcgcaaggcctcgcgccacgcctcctccgactggatggagatcgaa
aagcaacgcggcatctcggtggcctcctcggtcatgcagatggagtaccgcgactgcatc
atcaacctgctggacaccccgggccaccaggacttctccgaagacacctatcgggtgctg
acggcggtcgacgccgcgctcatggtgatcgacgccggcaacggcgtggagccgcagacc
aagcgtctgctgcaggtctgccgcgcacgcaacacccccatcatcaccttcatcaacaag
ctcgaccgcgaagtgcgcgagccgctggaactgctgtccgagatcgaaagccaccttggc
atggacacggtgccattctcctggccggtgggcatgggcaagtccttcggcggtgtgttc
gatatccgccgcgaccgcatgcgcctgttccgcccgggccaggagcgccgcgacgatgac
gacgccttcatccagggcctgaacaacccggagatcagccaacgcttcggccaggccttc
gagcaggccagcggcgagatcgagctcatcaccgaggcctcgccgccgtttgaccatgcg
gccttcctggccggcaaacagacgcccgtattcttcggttcggccatcaacaacttcggc
gtgcaggaagtgctggacgcgctggtggaactggcgccggcgcccgggccgcgccacgcc
atggagcgcgaggtccagcccgaggagcccaagttctccggcgtcgtgttcaaggtgcag
gccaacatggacccggcccaccgcgaccgcgtggcgttcgtgcgcgtgagctcgggccgc
ttcgagcgcggcatgcgcctgaaggtggcgcgcaccaacaaggagatgcgccccaataac
gtggtgtccttcctttcgcaacgccgcgaactgctggacgaagcctatgccggcgacgtg
atcggcattcccaaccatggcgtgctgcaactgggcgacgtgctgaccgaaggcgaaacc
ctgcacttcaccgggctgcctttcttcgcaccggaactgttccaggccgtcgaagtgaag
gatccgctgcgcaccaagcaactgcgcgtgggcctgacgcagctgggcgaagagggcgcc
atccaggtgttccgccccgaagtcgccggcggcgcgctgctgctgggcgcggtcggccag
ttgcagttcgaagtggtcgctcaccgcctgaaaaccgagtatggcgtggacgcccgattg
atgccttcacgctacaccatggcgcgctggatcacctccgaaaaccccaaagccttgcgc
aagttcatggatgccaatgctgcccatatcgcctatgatgtggtcgacgctgcggcgttt
ctcatcggctcgcccgcgcaattgcgcgtggcagaagaactgtatccggaagtgaaattc
cacgcgatgcgcgagcatagcggtaaggttttcggagagcaggcctga
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