KEGG   Burkholderia humptydooensis MSMB43: AQ610_28945
Entry
AQ610_28945       CDS       T04266                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bud  Burkholderia humptydooensis MSMB43
Pathway
bud03030  DNA replication
bud03410  Base excision repair
bud03420  Nucleotide excision repair
bud03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AQ610_28945
   03410 Base excision repair
    AQ610_28945
   03420 Nucleotide excision repair
    AQ610_28945
   03440 Homologous recombination
    AQ610_28945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bud03032]
    AQ610_28945
   03400 DNA repair and recombination proteins [BR:bud03400]
    AQ610_28945
Enzymes [BR:bud01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AQ610_28945
DNA replication proteins [BR:bud03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AQ610_28945
DNA repair and recombination proteins [BR:bud03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AQ610_28945
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AQ610_28945
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: ALX46382
UniProt: A0A7U4SW76
LinkDB
Position
2:complement(2322890..2325670)
AA seq 926 aa
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKDVSAEY
SACVFDAKGKTFRDDLYADYKAHRPPMPPDLALQIEPIHAAVRALGWPLLMIEGVEADDV
IGTLAKQAEQHGMNVIVSTGDKDLAQLVTDRVTLINTMTNEALDRDGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAVKWLTQYGSLDGVVEHAGEIKGVVGDNLRRALDFLP
LARQLVTVETACELAPHVESFDASLATDGEGRDALRDIFAKYGFKTWLRELDSESAANGA
LATVAAAGAAPDPASGATAELPLAAARNYATVQTWEQFDAWLATISAAELTAFDTETTSL
DPMLAQIVGLSFSVEPGHAAYVPLAHRGPDLPAQLPRDEVLAKLTPWLEDASRKKLGQHL
KYDAQVLANYGIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAQ
QIGFDEVPLDKASEYAAEDADITLQLHRALYPQVAREPGLMRVYRDIEMPVSLVLRKMER
TGVLIDSDRLSRQSSEIATRLVELEQEAYALAGGEFNLGSPKQIGQIFFERLQLPVVKKT
PSGAPSTDEEVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPNTGRVHTNYAQA
VAVTGRLASNDPNLQNIPVRTAEGRRIREAFIAPPGSKIVSADYSQIELRIMAHISEDES
LLRAFAHGEDIHRATAAEVFGVTPLEVTSDQRRIAKVINFGLIYGMSSFGLASNLGITRD
AAKLYIDRYFLRYPGVAHYMEETRARAKERGYVETVFGRRLWLPEINGGNGPRRQAAERA
AINAPMQGTAADLIKLSMIAVDDWLERGGLRARMIMQVHDELVLEVPDGELSVVREKLPE
MMCGVAKLKVPLVAEVGVGENWEEAH
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgatggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgcggccctggcggggagccgaccgga
gcgctctacggaatcatcaatatgctgcgccgcatgcgcaaggatgtcagtgcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaaccttccgcgacgatctgtacgccgattac
aaggcgcaccggccgccgatgccgcccgatctcgcgctgcagatcgagccgatccacgcg
gccgtgcgcgcgctcggctggccgctgctgatgatcgagggcgtcgaggccgacgacgtg
atcggcacgctcgcgaagcaggccgagcagcatggcatgaacgtgatcgtgtcgacgggc
gacaaggatctcgcgcagctcgtcaccgatcgcgtcacgctcatcaacacgatgacgaac
gaggcgctcgatcgcgacggcgtgctcgcgaagttcggcgtgccgccggagcggatcgtc
gattacctgtcgctcatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtcaagtggctgacgcaatacggctcgctcgacggcgtcgtcgagcat
gcgggcgagatcaagggcgtcgtcggcgacaacctgcgccgcgcgctcgatttcctgccg
ctcgcgcgccagctcgtgacggtcgagaccgcgtgcgagcttgcgccgcacgtcgaatcg
ttcgacgcgtcgctcgcgacggacggcgaaggccgcgacgcattgcgcgacatcttcgcg
aaatacggcttcaagacctggctgcgcgagctcgacagcgaatccgccgcgaacggcgcg
ctcgccacggtggccgcggccggcgccgcgccggaccctgcaagtggcgcgacggccgag
ctgccgctcgccgctgcgcgcaactacgcgaccgtgcagacgtgggagcagttcgacgcg
tggctcgcgacgatctccgccgccgagctgaccgcattcgacaccgagacgacatcgctc
gatccgatgctcgcgcagatcgtcggcctgtcgttctcggtggagccgggccatgccgcg
tacgtgccgctcgcgcaccgcgggccggacctgcccgcgcaactgccgcgcgacgaagtg
ctcgcgaagctcacgccgtggctcgaggacgcgagcaggaagaagctcggccagcatctg
aagtacgacgcgcaggtgctcgcgaactacgggatcgcgctgaacggcatcgagcacgac
acgctgcttgaatcgtatgtgctcgaatcgcaccgcacgcacgacatggatagcctcgcg
ctgcgccatctcggcgtgaagacgatcaagtacgaggacgtcgcgggcaagggcgcgcag
cagatcggcttcgacgaagtcccgctcgacaaggcgtccgaatacgcggccgaggacgcg
gacatcacgctgcaactgcatcgcgcgctgtatccgcaggtcgcgcgcgagccggggctc
atgcgcgtgtatcgcgacatcgagatgccggtgtcgctcgtgttgcgcaagatggagcgc
accggcgtgctgatcgacagcgaccggttgagccgacagagcagcgagatcgcgacgcgg
ctcgtcgagctcgagcaggaggcctacgcgctcgcgggcggtgaattcaatctcggctcg
ccgaagcagatcggccagatcttcttcgagcggctgcagttgcccgtcgtcaagaagacg
ccgagcggcgcgccgtcgaccgacgaagaggtgctgcaaaagctcgccgaggactatccg
ctgccgaagctgctgctcgagcatcgcggtttgtcgaagctgaagtccacttacaccgac
aagctgccgcggatggtcaacccgaacacgggccgcgtgcacacgaactatgcgcaggcg
gtggcggtcacggggcggctcgcgtcgaacgatccgaacctgcagaatatcccggtgcgc
acggcggaagggcggcgcatccgcgaggcgttcatcgcgccgccgggcagcaagatcgtg
tcggccgactattcgcaaatcgagctgcgcatcatggcgcacatctcggaggacgagtcg
ctgctgcgcgcgttcgcgcacggcgaggacattcaccgcgcgaccgcggccgaggtgttc
ggcgtgacgccgctcgaagtgacgtccgatcagcggcgcatcgcgaaggtgatcaacttc
ggcctgatctacgggatgagctcgttcggtctcgcgtcgaatctcggcatcacgcgcgac
gcggcgaagctctacatcgaccgctacttcctccgctatccgggcgtcgcccactacatg
gaggagacgcgcgcgcgggcgaaagagaggggctacgtcgaaaccgtgttcggccgccgc
ctgtggctgccggagatcaacggcggcaacgggccgcgccgccaggccgccgagcgcgcg
gcgatcaacgcgccgatgcagggcacggccgccgatctgatcaagctgtcgatgatcgcg
gtcgacgactggctcgagcgcggcggcttgcgcgcacgaatgatcatgcaggtgcacgac
gaactcgtgctcgaggtgccggacggcgagctgtccgtcgtgcgcgagaagctgcccgag
atgatgtgcggcgtcgcgaaactgaaggtgccgctcgtcgccgaggtcggcgtcggcgag
aactgggaagaggcgcactga

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