Burkholderia humptydooensis MSMB43: AQ610_28945
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Entry
AQ610_28945 CDS
T04266
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bud
Burkholderia humptydooensis MSMB43
Pathway
bud03030
DNA replication
bud03410
Base excision repair
bud03420
Nucleotide excision repair
bud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AQ610_28945
03410 Base excision repair
AQ610_28945
03420 Nucleotide excision repair
AQ610_28945
03440 Homologous recombination
AQ610_28945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bud03032
]
AQ610_28945
03400 DNA repair and recombination proteins [BR:
bud03400
]
AQ610_28945
Enzymes [BR:
bud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AQ610_28945
DNA replication proteins [BR:
bud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AQ610_28945
DNA repair and recombination proteins [BR:
bud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AQ610_28945
NER (nucleotide excision repair)
GGR (global genome repair) factors
AQ610_28945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ALX46382
UniProt:
A0A7U4SW76
LinkDB
All DBs
Position
2:complement(2322890..2325670)
Genome browser
AA seq
926 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKDVSAEY
SACVFDAKGKTFRDDLYADYKAHRPPMPPDLALQIEPIHAAVRALGWPLLMIEGVEADDV
IGTLAKQAEQHGMNVIVSTGDKDLAQLVTDRVTLINTMTNEALDRDGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAVKWLTQYGSLDGVVEHAGEIKGVVGDNLRRALDFLP
LARQLVTVETACELAPHVESFDASLATDGEGRDALRDIFAKYGFKTWLRELDSESAANGA
LATVAAAGAAPDPASGATAELPLAAARNYATVQTWEQFDAWLATISAAELTAFDTETTSL
DPMLAQIVGLSFSVEPGHAAYVPLAHRGPDLPAQLPRDEVLAKLTPWLEDASRKKLGQHL
KYDAQVLANYGIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAQ
QIGFDEVPLDKASEYAAEDADITLQLHRALYPQVAREPGLMRVYRDIEMPVSLVLRKMER
TGVLIDSDRLSRQSSEIATRLVELEQEAYALAGGEFNLGSPKQIGQIFFERLQLPVVKKT
PSGAPSTDEEVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPNTGRVHTNYAQA
VAVTGRLASNDPNLQNIPVRTAEGRRIREAFIAPPGSKIVSADYSQIELRIMAHISEDES
LLRAFAHGEDIHRATAAEVFGVTPLEVTSDQRRIAKVINFGLIYGMSSFGLASNLGITRD
AAKLYIDRYFLRYPGVAHYMEETRARAKERGYVETVFGRRLWLPEINGGNGPRRQAAERA
AINAPMQGTAADLIKLSMIAVDDWLERGGLRARMIMQVHDELVLEVPDGELSVVREKLPE
MMCGVAKLKVPLVAEVGVGENWEEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgatggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgcggccctggcggggagccgaccgga
gcgctctacggaatcatcaatatgctgcgccgcatgcgcaaggatgtcagtgcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaaccttccgcgacgatctgtacgccgattac
aaggcgcaccggccgccgatgccgcccgatctcgcgctgcagatcgagccgatccacgcg
gccgtgcgcgcgctcggctggccgctgctgatgatcgagggcgtcgaggccgacgacgtg
atcggcacgctcgcgaagcaggccgagcagcatggcatgaacgtgatcgtgtcgacgggc
gacaaggatctcgcgcagctcgtcaccgatcgcgtcacgctcatcaacacgatgacgaac
gaggcgctcgatcgcgacggcgtgctcgcgaagttcggcgtgccgccggagcggatcgtc
gattacctgtcgctcatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtcaagtggctgacgcaatacggctcgctcgacggcgtcgtcgagcat
gcgggcgagatcaagggcgtcgtcggcgacaacctgcgccgcgcgctcgatttcctgccg
ctcgcgcgccagctcgtgacggtcgagaccgcgtgcgagcttgcgccgcacgtcgaatcg
ttcgacgcgtcgctcgcgacggacggcgaaggccgcgacgcattgcgcgacatcttcgcg
aaatacggcttcaagacctggctgcgcgagctcgacagcgaatccgccgcgaacggcgcg
ctcgccacggtggccgcggccggcgccgcgccggaccctgcaagtggcgcgacggccgag
ctgccgctcgccgctgcgcgcaactacgcgaccgtgcagacgtgggagcagttcgacgcg
tggctcgcgacgatctccgccgccgagctgaccgcattcgacaccgagacgacatcgctc
gatccgatgctcgcgcagatcgtcggcctgtcgttctcggtggagccgggccatgccgcg
tacgtgccgctcgcgcaccgcgggccggacctgcccgcgcaactgccgcgcgacgaagtg
ctcgcgaagctcacgccgtggctcgaggacgcgagcaggaagaagctcggccagcatctg
aagtacgacgcgcaggtgctcgcgaactacgggatcgcgctgaacggcatcgagcacgac
acgctgcttgaatcgtatgtgctcgaatcgcaccgcacgcacgacatggatagcctcgcg
ctgcgccatctcggcgtgaagacgatcaagtacgaggacgtcgcgggcaagggcgcgcag
cagatcggcttcgacgaagtcccgctcgacaaggcgtccgaatacgcggccgaggacgcg
gacatcacgctgcaactgcatcgcgcgctgtatccgcaggtcgcgcgcgagccggggctc
atgcgcgtgtatcgcgacatcgagatgccggtgtcgctcgtgttgcgcaagatggagcgc
accggcgtgctgatcgacagcgaccggttgagccgacagagcagcgagatcgcgacgcgg
ctcgtcgagctcgagcaggaggcctacgcgctcgcgggcggtgaattcaatctcggctcg
ccgaagcagatcggccagatcttcttcgagcggctgcagttgcccgtcgtcaagaagacg
ccgagcggcgcgccgtcgaccgacgaagaggtgctgcaaaagctcgccgaggactatccg
ctgccgaagctgctgctcgagcatcgcggtttgtcgaagctgaagtccacttacaccgac
aagctgccgcggatggtcaacccgaacacgggccgcgtgcacacgaactatgcgcaggcg
gtggcggtcacggggcggctcgcgtcgaacgatccgaacctgcagaatatcccggtgcgc
acggcggaagggcggcgcatccgcgaggcgttcatcgcgccgccgggcagcaagatcgtg
tcggccgactattcgcaaatcgagctgcgcatcatggcgcacatctcggaggacgagtcg
ctgctgcgcgcgttcgcgcacggcgaggacattcaccgcgcgaccgcggccgaggtgttc
ggcgtgacgccgctcgaagtgacgtccgatcagcggcgcatcgcgaaggtgatcaacttc
ggcctgatctacgggatgagctcgttcggtctcgcgtcgaatctcggcatcacgcgcgac
gcggcgaagctctacatcgaccgctacttcctccgctatccgggcgtcgcccactacatg
gaggagacgcgcgcgcgggcgaaagagaggggctacgtcgaaaccgtgttcggccgccgc
ctgtggctgccggagatcaacggcggcaacgggccgcgccgccaggccgccgagcgcgcg
gcgatcaacgcgccgatgcagggcacggccgccgatctgatcaagctgtcgatgatcgcg
gtcgacgactggctcgagcgcggcggcttgcgcgcacgaatgatcatgcaggtgcacgac
gaactcgtgctcgaggtgccggacggcgagctgtccgtcgtgcgcgagaagctgcccgag
atgatgtgcggcgtcgcgaaactgaaggtgccgctcgtcgccgaggtcggcgtcggcgag
aactgggaagaggcgcactga
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