Burkholderia sp. RPE67: BRPE67_ACDS00480
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Entry
BRPE67_ACDS00480 CDS
T03604
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bue
Burkholderia sp. RPE67
Pathway
bue03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRPE67_ACDS00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_ACDS00480
Enzymes [BR:
bue01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BRPE67_ACDS00480
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BRPE67_ACDS00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
COMM_domain
Motif
Other DBs
NCBI-ProteinID:
BAO85103
LinkDB
All DBs
Position
1:55085..55870
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AA seq
261 aa
AA seq
DB search
MFRVITANLNGIRSAAKKGFFDWFGEQKSDVVCVQEIKCSQDDLTPEFLAPHGFQGYFQH
AVKKGYSGAGLYTRHEPDDVIIGFGSEEFDPEGRYVEARFGKLSVVSVYVPSGSSGDERQ
QAKYRFMDEFMPHLAELSKEREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEEREWLTK
LFDDVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATKEIAATAKTTSIFRD
IKFSDHAPLTIDYDWKPGKKK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcgtgattaccgccaatctgaacggcattcgatcggccgccaagaagggcttt
ttcgactggttcggcgagcagaaatccgatgtggtgtgcgtgcaggaaatcaaatgctcg
caggacgacctgacgcccgagtttctcgcgccgcacggttttcaaggctatttccagcac
gcggtgaagaagggttatagcggcgcgggcctctatacgcgtcatgagccggacgatgtg
atcatcggcttcggttccgaagagttcgatccggaagggcgctacgtggaagcgcgcttc
ggcaaactctccgtggtgtcggtgtacgtgccgtcggggtccagcggcgacgagcggcag
caagcgaagtatcgcttcatggacgagttcatgccgcatctcgccgagttgtcgaaggaa
cgcgaagtcattctgtgcggcgatgtgaacatcgtgcacaaggaaatcgacatcaagaac
tggaagagcaaccagaagaattcaggctgcctgccggaagagcgcgagtggctcacgaag
ctgttcgacgatgtcggttatgtcgatgtgttccgcacgctcgatcagcgtcccgagcag
tacacgtggtggagcaatcgcggccaggcgtatgcgaagaacgtcgggtggcgtatcgac
tatcagatcgcgacgaaggaaatcgccgcgaccgcgaagacgacgtcgatctttcgcgac
atcaaattcagcgaccatgcgccgctgacgatcgattacgactggaagccaggcaagaag
aagtga
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