Burkholderia sp. CCGE1001: BC1001_1339
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Entry
BC1001_1339 CDS
T01424
Name
(GenBank) transcriptional regulator, LysR family
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bug03000
]
BC1001_1339
Transcription factors [BR:
bug03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BC1001_1339
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
NMT1_3
HTH_30
DUF2802
Motif
Other DBs
NCBI-ProteinID:
ADX54775
LinkDB
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Position
1:complement(1525856..1526779)
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AA seq
307 aa
AA seq
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MELRHLRYFVAVAEERNFTRAAQRLHIAQPPLSRQIQQLEESLGVQLFERNSRPLKLTET
GKFFYSHAVQLLAQTHDLESMTRRVGNIERSLSVGFVGSTLYGMLPKIIRRFRDENKTVE
LSLHEMSTMDQIRALKDGRIDVGFGRIRHEDANIRRVILREEKMIVALPVGHPLSIAKPV
LALRDVIQETLIIFPKAPRPSYADQVLAAFQDRALTPRRIYEVRELQIALGLVAAGEGIS
IVPSSVYGLKRDDVSYKELDDPTLVSPLIMSMRALDESRDIKEMLELIYRLYEEERIPHT
PRTDAAP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggagttgcgacatcttcgctatttcgtggcggtggccgaggagcgtaacttcacccgc
gctgcgcaaaggcttcatatcgcgcagcctccgttgagccggcaaattcagcaactcgaa
gaatcactcggcgtacaactgttcgagcgcaactcgcgcccgttgaaactgaccgagacc
ggcaagttcttctactcgcatgctgtgcagttgctcgcgcagactcacgacctcgagtcc
atgacgaggcgcgtcggcaatatcgagcgcagcctctcggtgggcttcgtcggctcgacg
ctctacggaatgttgccgaaaatcattcggcgcttccgtgacgagaacaagaccgtcgaa
ctcagcctgcacgaaatgtcgacgatggatcagattcgcgcgctcaaggacggccgcatc
gacgtcggtttcggtcggatccgccatgaggacgccaacattcggcgcgtgattctgcgc
gaagagaagatgattgtcgcgctccccgtcgggcatccgctttcgattgcgaagcctgtg
ctcgcgcttcgagacgtcatccaggaaacgctgatcattttcccgaaagcgccgaggccg
agctatgccgatcaggtcctcgcggctttccaggaccgtgcgctcacccctcgccgcatc
tacgaagtccgggaattgcagattgcgctgggtctggttgcggcgggcgaagggatctct
attgttccgagcagtgtgtacggcctgaagcgcgacgatgtgagttacaaggagttggac
gatcccactttggtgtcgcccctcatcatgagcatgcgcgcgctcgacgagtcgagggac
atcaaggaaatgctcgaactcatctatcggctctacgaagaggagcgcataccccatacg
ccgcgtaccgacgcggcaccgtag
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